Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0004 ATGGCGAAATCGAGGACTTCCAATTCCTCTAATGTCTACGAAGACGACTCTAGCAATAGAGGAGATGAGGAATCCTGTTCTACACGTGACATTGCCGTCCTGCATATCTTTTCATCTATGGCGGCTCCTTTTTCGACCGTGTCAAATGTCAGGTCTTTGCCGAGTCCACGAAGCGGTACTCAGATAAGAGTTATGTATCCCATGAATAGTGCTAGTTCATTTAAGCTCACGGGGTTTCCGACGCGATCAAGCATCTGCTTCTCATTGAGCGCCTTCGCCGGGTCGTTGCCTTTGGTGCCTTCCTTTTCTTCTCGGAATGCTTCTTCCTTTGAAAGAACGCGTTTTACCAGCTTTGTTCGGGCCAGTTCTGAGGAAGCACCTTTACAATCAAAAATTACTCAGAAGGTGTACTTTGACATAAGTATCGGAAATCCTGTGGGGAAGCTTGCTGGAAGAATTGTGATTGGACTCTATGGTGATGATGTGCCCCAAACAGTTGAGAACTTCCGTGCCCTTTGCACAGGAGAGAAGGGCTTTGGGTATAGAGGTTCCGCATTCCATCGTGTAATAAAGGATTTCATGATTCAGGGAGGGGACTTTGACAAAGGGAATGGAACTGGAGGCAAAAGCATTTATGGCCGCACTTTCAAGGATGAGAATTTCAAGTTGTCTCATGCTGGACCAGGAGTTGTTAGTATGGCAAATGCGGGCCCTAACACCAATGGGAGCCAATTTTTTATATGTACTGTCAAGACACCCTGGCTGGATCAGAGGCATGTAGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGTTAATTGAATCACAGGAGACTGATCGAGGTGATCGTCCGAGGAAGAAGGTGGTTATCATTGACTCTGGTGAGCTTCCAATAGCTTGA 906 0.4625 MAKSRTSNSSNVYEDDSSNRGDEESCSTRDIAVLHIFSSMAAPFSTVSNVRSLPSPRSGTQIRVMYPMNSASSFKLTGFPTRSSICFSLSAFAGSLPLVPSFSSRNASSFERTRFTSFVRASSEEAPLQSKITQKVYFDISIGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYRGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHAGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKKVVIIDSGELPIA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0004 301 MobiDBLite consensus disorder prediction 1 24 - -
Mibi13g0004 301 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 148 295 IPR002130 GO:0000413|GO:0003755
Mibi13g0004 301 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 181 198 IPR020892 GO:0003755|GO:0006457
Mibi13g0004 301 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 147 297 IPR002130 GO:0000413|GO:0003755
Mibi13g0004 301 FunFam Peptidyl-prolyl cis-trans isomerase 122 301 - -
Mibi13g0004 301 Gene3D - 121 300 IPR029000 -
Mibi13g0004 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 229 244 IPR002130 GO:0000413|GO:0003755
Mibi13g0004 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 257 272 IPR002130 GO:0000413|GO:0003755
Mibi13g0004 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 IPR002130 GO:0000413|GO:0003755
Mibi13g0004 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 244 256 IPR002130 GO:0000413|GO:0003755
Mibi13g0004 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 198 IPR002130 GO:0000413|GO:0003755
Mibi13g0004 301 SUPERFAMILY Cyclophilin-like 128 298 IPR029000 -
Mibi13g0004 301 CDD cyclophilin_ABH_like 135 296 - -
Mibi13g0004 301 MobiDBLite consensus disorder prediction 1 15 - -
Mibi13g0004 301 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 135 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0004 Mibi-ChrMibi13 116777 122001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0004 102 295 U-box Gene Family AT5G67530 42.347 3.58e-37 137