Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0003 ATGGACTTTAGCTTGTTGTCATGCTTCGATCGTTTCAGAAGTTCTGCCAATTCATTCCTATCGCAATACGAACCAATTGTTCTGCTTCTGTCTCCTTTGCTTGCTGTCCTCCTCGCCCACACAATTCGGTCGTTTTTTCATGTGGTTCACGATAGAGGGCTTAAACCCGCTCTTCTAGGGCTACTTATCAACTCTATCAAATTGATCCCTGGCGTGAAGAGTTACATCAATGCCGAAAAGCAGAAGGTTGTGGATAAGTTGCAGTCTGACGGTAAATCCAGAAGGGAAGGTTGGAGAACAGAGTTACCTATGGCAGGACTAGGGATGGAAGTTCTTGAGAAAATGAGAGATGAGAAAAGAAATGATGTGATTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATTTGATGCACACTTTTCTTTGATAAATGAGGCATGCTCAATGTTTGCACACACCAATCCCTTGCATTTGGATGTATTTCAAAGTGTTGTACGATTTGAGGCAGAAGTGGTTGCAATGACAGCTGCACTTCTTGGAGGTAAAGAAAAGAGTTCGGGGGGACATATTTGTGGAAATATGACATCGGGAGGGACTGAAAGTATATTATTAGCTGTCAAATCATCACGTGACTATATGAAGTCGAAAAAAGGAATTACAAGACCTGAAATGATAATACCTGAATCTGCACACTCAGCATATGACAAGGCTGCTCAATATTTTAACATCAAATTATGGCGAATTCCTGTTAACAAAAGATTTCAAGCAGATCTAAAATCAATTCGACGTCATATTAACAAAAATACCATCTTGATTGTTGGTTCTGCCCCAGGATTTCCTCATGGAATAATTGACCCCATTGAAGAACTTGGTGACTTGGCATCAAGCTTTGGAATTTGCTTTCATGTTGACCTCTGTCTTGGTGGCTTTGTTTTACCCTTTGCTTGCAAGCTTGGGTACTCCATTCCACCTTTTGACTTTTCTGTTAAAGGAGTTTCTTCAATATCTGTGGACGTGCATAAATATGGTTTAGCTCCTAAAGGAACAAGTATAGTACTATACAGGAACCATGACATCAGAAAGCATCAATTTGTTGCTGTGACTGAGTGGTCAGGTGGATTGTATGTTTCTCCAACCATGGCTGGAAGCAGGCCCGGAGGTCTTATTGCTGGGGCTTGGGCAGCAATGATGTCCTTAGGGGAAGAAGGTTACCTGGAGAATACAAAAGCAATTATGGATGTTTCAAGAAGAATACAGGAAGGCATAGGAGAGATTCCAGAATTATTCGTAGTTGGAAAACCGGACATGACAATTGTAGCTTTTGGATCTGATGTTCTGGACATATTTGAAGTCAATGATATCATGTCATCCAGAGGGTGGCATCTGAATGCATTGCAAAGGCCTAACAGCATTCATATCTGTGTGACACTGCAGCATTTGGCGGTTGTTGAAGACTTCCTCAGGGATTTAAAGGAATCTGTGATAACCGTAAAAGAAAATCCTGGTCCAGTAAGTGGAGGGTTGGCACCTATATATGGTGCGGCAGGCAGCATGCCTGATAGAGGTATGGTACAGGAATTGCTGGTAGATTTCATGGACGGTACTTGCTAG 1623 0.4202 MDFSLLSCFDRFRSSANSFLSQYEPIVLLLSPLLAVLLAHTIRSFFHVVHDRGLKPALLGLLINSIKLIPGVKSYINAEKQKVVDKLQSDGKSRREGWRTELPMAGLGMEVLEKMRDEKRNDVIWQGKCSGTVYIGGSEFDAHFSLINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGGKEKSSGGHICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESAHSAYDKAAQYFNIKLWRIPVNKRFQADLKSIRRHINKNTILIVGSAPGFPHGIIDPIEELGDLASSFGICFHVDLCLGGFVLPFACKLGYSIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHDIRKHQFVAVTEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSLGEEGYLENTKAIMDVSRRIQEGIGEIPELFVVGKPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICVTLQHLAVVEDFLRDLKESVITVKENPGPVSGGLAPIYGAAGSMPDRGMVQELLVDFMDGTC 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0003 540 SUPERFAMILY PLP-dependent transferases 110 501 IPR015424 -
Mibi13g0003 540 FunFam sphingosine-1-phosphate lyase 1 140 404 - -
Mibi13g0003 540 FunFam Sphingosine-1-phosphate lyase 1 501 539 - -
Mibi13g0003 540 PANTHER - 39 540 - -
Mibi13g0003 540 Pfam Pyridoxal-dependent decarboxylase conserved domain 151 445 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mibi13g0003 540 Gene3D - 137 404 IPR015421 GO:0003824
Mibi13g0003 540 Gene3D - 101 537 - -
Mibi13g0003 540 FunFam Sphingosine-1-phosphate lyase 1 391 503 - -
Mibi13g0003 540 Gene3D Aspartate Aminotransferase, domain 1 109 503 IPR015422 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0003 156 500 Calmodulin-binding Proteins AT3G17760 26.301 2.21e-25 107