Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2173 ATGGAAAGTGTGAAGTTGAATGTGGGATGCATTGAGGGTAAAAGAGGGCTTCTAGAAGAGGGAGATGCTGGGTTTCTAACATTCACTGAGTCTCTACTTTTACAGGTTGCTACTTCAGTGGTTGAGCAGTACAAGTTCTACATACTGCCTCCTGTTGAAGCCTCAATTTCTAGTCCTGTCAGAGTTGCATATCAGATGGGCAATTCAAGGGATTATGATTCAGGTTCTCATCTGGCTGAGGAGCATGGTAGATCTGATACTATAAAGGCAAGAGGTCCAGCAAGTGATGCAGATTTAAGCTTCTCCTACCCGTGCCTTAAGATTTCTCAAGCTGAAGATTGTGCTTGTCATTCTACAGCTGAACAGCATAGCATATCTGAAAATATTGTGAAGCAGGAAAGAATCTCGGAGAAAAATTTTGTATGTGTAGACCCAAGTTACCTGAAAACTCTTGGTCAAGTTCATTCTGGGTGGATTTTTGGTGGAATAGCTGAACTTGTTGATAATTCAAGAGACGCCCAGGCAAATAAGATGGACATTTTTATAGATATGATAAAGTTGAAGAAATCTGGCAAGGATGAACCAATGCTTTCAGTTATTGATGATGGCCAAGGTATGGAATACAAAGACATTTTGAAAATGGTTTCCTTTGGGCACAAGCAAAGTAACAGTGATGATCCAGATCGCATTGGCAGATTTGGTGTTGGATTCAAGACTGGAGCAATGAGGCTTGGCAATGATGCTCTTGTTTTAACCCAGACTGCTAATTCCAGATGTATAGCTTTCATTTCACAGTCTTTGAATGAAGGGAAAGAGAATGTTGAGATCCCTGTAGTTTGCTATCGCCGACAAGGACAGTGCATGGAAGTGGATACAAGTGTTCAGTCTAAAGCCGCGGCTAAGTGCAACTTGAAAGCCATTAAGGAGTTCTCTCCATTTAATAAGTATCTTATTGGTGAAAAGGCTGCATTGTTTTCCAGTGGCACAGGAACACAAATTTACATATGGAACCTGGATAAATGGGGATCAGATTATTGTCTGCAATGGTATGATGGATTAAAAGGCAGCAGCTCTTTCCACCATGGTGACATTTTCATCCGATCTCGAAGAATCCGTTCTCGGCTTGGCCAAGTTAGTGTTAAGGTTCCATTGGATTATTCGCTTAGATCTTATCTAGAAGTTATCTTTTCAGTTCCTCGGATGAAAATAAGCGTTCAACACTCGCTGGTTAAAAGTTGTCCTCTCGGAAATTTTCTTACTAAAACCGTCATTGAAACTGGTTGTGTCCTGGAAAAGCATGTTCACTTGATTCTGGGATTCAGTCAATTAGAATGGGAGCAGGCAAACTGCGGAATATTTTTGTATTGGCATGGTCGCTTAATTGAAGCTTACAAGAGAGTTGGTGGCATGATTCATACTGCAGATTTGGGTCGTGGTGTAATTGGTGTGGTAGATGTGACTGATTTGATGGATGATGGGGATGGTCGTGTCTGGGTGCATAATAACAAGCAGGGATTCCAGGACTGTGAATCATATGCACGTCTAGAGCTGTGGCTTGGTAGGAAAGTAGATGAATACTTGGACAATAATTTTGACTCACTCACGTTGGACAGTGATAATTGTCTATACAAGCCAGATTGCGAATGGGTACAATGCGACAAGTGCAGAAAATGGAGAATCTTGCCTCTTGATTTTGACATCACATTGTTACCTGCACAATGGTTCTGTTATATGGAGCCCTTCAAAGGACTGTGTGCAGCTGCAGAAGAAAAAATGGAGCATGGCATTGTCAATGTTTCGACAAAGCGGTCTGGATATGATAGTGGGCAGGAAGATTCTTTTTGTGATGACAAGGTGGATCCTATGAATCTTTCAAAGGCTACAGCTGATGAAAGGTGGGTCGGCTGTGGAGATTTGAAAACGCATGCTTTCAAAAGATTGAGAAGGGGACCTCATAATGCTAAGGTTATGTCTCTGCATCCCAAACGTTCAACCTAG 1998 0.4174 MESVKLNVGCIEGKRGLLEEGDAGFLTFTESLLLQVATSVVEQYKFYILPPVEASISSPVRVAYQMGNSRDYDSGSHLAEEHGRSDTIKARGPASDADLSFSYPCLKISQAEDCACHSTAEQHSISENIVKQERISEKNFVCVDPSYLKTLGQVHSGWIFGGIAELVDNSRDAQANKMDIFIDMIKLKKSGKDEPMLSVIDDGQGMEYKDILKMVSFGHKQSNSDDPDRIGRFGVGFKTGAMRLGNDALVLTQTANSRCIAFISQSLNEGKENVEIPVVCYRRQGQCMEVDTSVQSKAAAKCNLKAIKEFSPFNKYLIGEKAALFSSGTGTQIYIWNLDKWGSDYCLQWYDGLKGSSSFHHGDIFIRSRRIRSRLGQVSVKVPLDYSLRSYLEVIFSVPRMKISVQHSLVKSCPLGNFLTKTVIETGCVLEKHVHLILGFSQLEWEQANCGIFLYWHGRLIEAYKRVGGMIHTADLGRGVIGVVDVTDLMDDGDGRVWVHNNKQGFQDCESYARLELWLGRKVDEYLDNNFDSLTLDSDNCLYKPDCEWVQCDKCRKWRILPLDFDITLLPAQWFCYMEPFKGLCAAAEEKMEHGIVNVSTKRSGYDSGQEDSFCDDKVDPMNLSKATADERWVGCGDLKTHAFKRLRRGPHNAKVMSLHPKRST 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2173 665 ProSiteProfiles Zinc finger CW-type profile. 543 593 IPR011124 GO:0008270
Mibi12g2173 665 Gene3D - 539 598 - -
Mibi12g2173 665 Gene3D - 130 318 IPR036890 -
Mibi12g2173 665 Pfam Morc6 ribosomal protein S5 domain 2-like 386 526 IPR041006 -
Mibi12g2173 665 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 159 318 IPR036890 -
Mibi12g2173 665 Pfam CW-type Zinc Finger 548 590 IPR011124 GO:0008270
Mibi12g2173 665 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 163 276 - -
Mibi12g2173 665 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 124 605 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2173 Mibi-ChrMibi12 38308627 38317002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2173 548 590 B3 DNA Binding Superfamily AT4G32010 45.652 3.59e-06 48.5