Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2170 ATGAATGTGTCCGCGTCAAATCCAGATACTTGTTGTACGTCCACGATGATCATTTCTGCGGAAACAACAGAGCCTCCTTGTCCGCCTGATTCTGTCACCACCTCCGCCGTCAATGGTTCTGCTACCTCTCCCTTCACCTGTGACCAAAACCCACCTCTCTCATCCGCATCTTCGTCCCCGCCTCCAGAACTCCAACTACCTGTATCGTGGCCCCAGGATGGGAAGCTCAGCCTCGATTGGATCTTTAATCTTATGGCCTGCTTCGACTGGTCTTCCAAGAACCTCCCTCCCTCTGAATTTCCTTCTGTTTTGCCGGTCCACGTCTTCGACTCTCTTATCCTTGTCGCTTCCAAAATGCTTCACAAAGAACCTAACTGTGTATCTGTAGACCCTTTTCAACCTAATTCCGACTCCGGGGACCGAGCTGCTTCTGCAGTTGTCGTTGTGGGGGACGTTCATGGCCAATTGCATGATCTATTGTTCCTCCTTAGAGATGCTGGTTATCCTTCTCAAAATCGCATGTTTGTCTTCAATGGTGATTATGTTGACAGAGGAGCTTGGGGTCTGGAAACTTTCTTGCTCTTGTTGGCGTGGAAGGTGTTTATGCCTCATAATGTGTATCTACTGCGCGGGAATCATGAATCAAAGTACTGTACATCTGTTTATGGCTTTGAGAAGGAAGTTATGGTAAAGTACAGTGATAAAGGTCAGCATGTATATCGGAAATGTTTGGGATGCTTTGAAGGTCTTCCTTTGGCATCTATTATAGCTGGACGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACTCCCTCAAAGAGATTAAAAGGAAAGAGAAACCGTAAGAATTATTCCAATCCTGATATTAAAACCTTGTCTCTGGGTTCATTGGAAGAATTATCTAAGGCTCGGCGATCAGTTCTTGATCCTCCTTGGGAAGGTTCAAACCTGATTCCTGGTGATGTTTTGTGGTCTGATCCTTCAAAAGATCCTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTATTGTGGGGTCCTGATTGTACTGATGAATTCTTGAAGAAATATCAGCTAAAGTTTATCATTAGGTCACATGAAGGTCCTGATGCAAGGGAAAAAAGGGATGGTTTTGATGGAATGGATGAAGGTTACACTATTGATCATATTGTGGAGTCTGGAAAGATGATAACCCTTTTCAGCGCTCCAGATTATCCACAATTTCAGGCAACAGATGACAGGTATAATAACAAAGGGGCTTATGTTGTCCTTGAACCCCCTCATTTTGACAATCCAGTATTTCATTGCTTTGAAGCAGTTACACCAAGGCCCAAGGTGAATGCTTATTATGATTATGAAGAGGTGATCGACTCGGATGAAGAATTGGACTTGGCATCCATGGTGACTGCTTGA 1425 0.4456 MNVSASNPDTCCTSTMIISAETTEPPCPPDSVTTSAVNGSATSPFTCDQNPPLSSASSSPPPELQLPVSWPQDGKLSLDWIFNLMACFDWSSKNLPPSEFPSVLPVHVFDSLILVASKMLHKEPNCVSVDPFQPNSDSGDRAASAVVVVGDVHGQLHDLLFLLRDAGYPSQNRMFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNVYLLRGNHESKYCTSVYGFEKEVMVKYSDKGQHVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSVTVTPSKRLKGKRNRKNYSNPDIKTLSLGSLEELSKARRSVLDPPWEGSNLIPGDVLWSDPSKDPGLAPNKERGIGLLWGPDCTDEFLKKYQLKFIIRSHEGPDAREKRDGFDGMDEGYTIDHIVESGKMITLFSAPDYPQFQATDDRYNNKGAYVVLEPPHFDNPVFHCFEAVTPRPKVNAYYDYEEVIDSDEELDLASMVTA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2170 474 SUPERFAMILY Metallo-dependent phosphatases 99 450 IPR029052 -
Mibi12g2170 474 MobiDBLite consensus disorder prediction 23 68 - -
Mibi12g2170 474 PRINTS Serine/threonine phosphatase family signature 145 172 IPR006186 GO:0016787
Mibi12g2170 474 PRINTS Serine/threonine phosphatase family signature 245 271 IPR006186 GO:0016787
Mibi12g2170 474 PRINTS Serine/threonine phosphatase family signature 208 232 IPR006186 GO:0016787
Mibi12g2170 474 PRINTS Serine/threonine phosphatase family signature 175 202 IPR006186 GO:0016787
Mibi12g2170 474 PRINTS Serine/threonine phosphatase family signature 399 415 IPR006186 GO:0016787
Mibi12g2170 474 PRINTS Serine/threonine phosphatase family signature 305 332 IPR006186 GO:0016787
Mibi12g2170 474 SMART pp2a_7 104 448 IPR006186 GO:0016787
Mibi12g2170 474 CDD MPP_PP7 70 455 IPR041754 -
Mibi12g2170 474 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 60 471 - -
Mibi12g2170 474 Pfam Calcineurin-like phosphoesterase 146 373 IPR004843 GO:0016787
Mibi12g2170 474 Gene3D - 99 469 IPR029052 -
Mibi12g2170 474 ProSitePatterns Serine/threonine specific protein phosphatases signature. 209 214 IPR006186 GO:0016787
Mibi12g2170 474 FunFam Serine/threonine-protein phosphatase 88 469 - -
Mibi12g2170 474 MobiDBLite consensus disorder prediction 23 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2170 Mibi-ChrMibi12 38256134 38260250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2170 67 364 Calmodulin-binding Proteins AT5G63870 70.234 6.06e-157 445