Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2160 ATGAAATTTCGATTTCTTTGCACACCACATGTTCTGATCATATTGCTAATCGTCTTTTGCTCGAGCTTAACCGGCGACGTCTCGGTATCAAAGTCTGAGAGCTCCCAGGTCTCAATTGCAGGCAATCGTGATGGAGACTTCAAGGGCTTAGCGTTACCTGCCAGCCGCTCTCCTCTGTCTCCTCCAGCTAAGCCTAGCACGGCACTAATTGTGGCCCCAGATCAAAATGGGACAATACATTTGGTGGATAGTGGTTCGATGAGGATAATATGGTCATTCCCAACAGGATCACCAATTTACAATTCATATCAAGCTCCTGTCAACAAGGATAATGGTAAAGACAATGCATCTGGACCAAGTAATGAGTTCATAGATGTAGGAGATGACTGGAGTTTATATCAAAGAAAGCCCTTTGGTAAAATGAGACTCTTAACATCTATCGAAGATATTGTTAAAGCTACACCTAAATTATCAAATGATGGAGTTGTTACACTTGGATCTAAAAGAAGTACTGTTTTTGAAGTTGATGCGGAAACTGGAAGGATCTTTCGAAGTTACGCTGCATCAGATTTTGATAATATCTTTGCACTGTGGAGTGATAACGGGCAGAGTGTTCAAAATACTCTCATTACTGAAAATGAGGAGTTGGTAAAGTCTGATCCTCTTAAGCTTCATACGCCAAAGCCGCTACTGATGTTATTTAGGACAGATTATTCTCTGCAAGCTGTTAGTCCTGGATCAGAAAAAGTTGTATGGAGTATTGCAGTAGCTGAATTTGAGGCTGTATTATATTGCCAACATAAAGAAAATCCAATTGATGGGGCATTATTTGATTCAGAGGGTAAGTATGCTTGTGACAGTGGCCTGGATTTTGCATTGCCATACCCATGTTGGGTGAAGAAAAAAGTCTACCGTCTACCGAAAAACTTTCTGGTACAACCTTCAATTGTTGAGAGATTACCCGAGGCTGATCATGGTAAAGAAATGCTCCCCATGCCCACTTCAGATCTGATGCTTCCTGTGCAGCCTAACAGTGAGAAATATCTTAAAGGCCATGATAATATTATGATGCTTCCCATGCCTGTGCCAAATTTGTTACCTCCCCTACTTCCAGAAATGGTCAATAGTGACAACACATTTGAGCTTGCTCAGCCTTGGACACAGATTATAACACGTGAGGAAGTTAATCTGAAGACAGATATTCCATGGTTATCTAGATTGGCTCCGGTGCTGTTGATAGTCTCTTTTCTGGTCTGCACAGTCTTTTGGTCAGTTAGAAAGCAATTGAAATTGAAAGGCCAAAATAGTGTACATGATTCAAAAAATACTATTAAGAAAAGAAGGACAGGAAAGTCTGGAAAGAATAATGGAATTGTTGACAAGAAGATGAAGCCGTTGGTATCAGAATATGACAAAGTAATGCCACGTTGTAGAGATGATAAGGAACTTTGGGTATATGTTAATAAAGTTGATGAATGTGCTGATGGGCGCAAGGTTGGTAAACTATTTGTATCAAATAAAGAAATTGCCAAGGGAAGCAATGGAACCATTGTTCTAGAAGGAATATATGAATGTCGAGCGGTTGCTGTAAAACGTCTTGTCCAGGCTCATCATGATGAGGCCTTTAAAGAAATTCAAAACCTTATTGCATCGGACAATCACTCAAATATTGTTCGATGGTATGGGGTGGAAAATGATCAAGATTTTGTCTACCTTGCGCTAGAGCGTTGCTCATGTAACTTAGACGATTTAATTCATATTTACTCAGATATAGCCGAAAATTCAGTGTTTAGCAAGAACCAAACTTTAAAGGCTCAATTGAAGATAGGAAACCAAAATATGCAGAATCTTTGGAAAGCAAATGGCCTCCCCTCACCTCTCCTATTGAAGCTAATGAGGGATATAGTTTCAGGGCTTTGTCATTTACATGAACTGGGAATAGTGCATCGGGATTTGAAACCTCAAAACATTTTGATAATCAATGAAAGATCTTTATGTGCAAAGCTTTCTGATATGGGCATCAGTAAACGTCTTCCGGAAGATATGTCATCTTTTGGCCTTAATGATACTGGCTGTGGTAGCTCAGGTTGGCAAGCACCAGAACAACTTGTCCAAGGACGTCAAACACGAGCTGTAGATTTATTTAGTTTAGGTTGTGTCTTATTTTTTTGTTTAACTGGGGGAAGACATCCATTTGGAGAACGTATTGAACGCGATCTTAATATAGTGAGAAATCAAAAGGATCTTTTCTTAGTGGATTTCATCCCAGAAGCAGAGGATCTTATTTCTTGTTTATTAAACCCTGAGCCTGATCTAAGGCCCAAGGCAATTGAAGTTCTGCACCATCCTTTCTTTTGGGATTCTGAAATGAGACTTTCTTTTCTCCGAGACGTCAGTGATAGAGTGGAATTGGAAGATAGGGAGACTGATTCTGATCTTTTAAAGGCATTGGAAGGTAGTGCATCAGTGGCTTTAAATGTGAACTGGGATGAAAAGATGGAACCAGCCTTCATCGCTAACATTGGCCGCTACCGGCGTTATAAATGTGATAGTGTTAGAGATTTATTACGAGTCATCAGAAACAAGCTGAATCACTTTAGAGAATTGCCTCAAGAAATTCAGGAACTTGTAGGACCTATTCCAGAAGGATTCAATCACTACTTTTCAAGTCGGTTCCCTAGACTCCTAATTGAAGTGTATAAAGTCATATGCAAATATTGCAAGGCTGAGGAATGTTTCCAGCGATACTTTTAA 2754 0.3976 MKFRFLCTPHVLIILLIVFCSSLTGDVSVSKSESSQVSIAGNRDGDFKGLALPASRSPLSPPAKPSTALIVAPDQNGTIHLVDSGSMRIIWSFPTGSPIYNSYQAPVNKDNGKDNASGPSNEFIDVGDDWSLYQRKPFGKMRLLTSIEDIVKATPKLSNDGVVTLGSKRSTVFEVDAETGRIFRSYAASDFDNIFALWSDNGQSVQNTLITENEELVKSDPLKLHTPKPLLMLFRTDYSLQAVSPGSEKVVWSIAVAEFEAVLYCQHKENPIDGALFDSEGKYACDSGLDFALPYPCWVKKKVYRLPKNFLVQPSIVERLPEADHGKEMLPMPTSDLMLPVQPNSEKYLKGHDNIMMLPMPVPNLLPPLLPEMVNSDNTFELAQPWTQIITREEVNLKTDIPWLSRLAPVLLIVSFLVCTVFWSVRKQLKLKGQNSVHDSKNTIKKRRTGKSGKNNGIVDKKMKPLVSEYDKVMPRCRDDKELWVYVNKVDECADGRKVGKLFVSNKEIAKGSNGTIVLEGIYECRAVAVKRLVQAHHDEAFKEIQNLIASDNHSNIVRWYGVENDQDFVYLALERCSCNLDDLIHIYSDIAENSVFSKNQTLKAQLKIGNQNMQNLWKANGLPSPLLLKLMRDIVSGLCHLHELGIVHRDLKPQNILIINERSLCAKLSDMGISKRLPEDMSSFGLNDTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCLTGGRHPFGERIERDLNIVRNQKDLFLVDFIPEAEDLISCLLNPEPDLRPKAIEVLHHPFFWDSEMRLSFLRDVSDRVELEDRETDSDLLKALEGSASVALNVNWDEKMEPAFIANIGRYRRYKCDSVRDLLRVIRNKLNHFRELPQEIQELVGPIPEGFNHYFSSRFPRLLIEVYKVICKYCKAEECFQRYF 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2160 917 ProSiteProfiles KEN domain profile. 788 917 IPR010513 GO:0004540|GO:0006397
Mibi12g2160 917 Gene3D Phosphorylase Kinase; domain 1 487 575 - -
Mibi12g2160 917 MobiDBLite consensus disorder prediction 438 458 - -
Mibi12g2160 917 SMART serkin_6 503 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2160 917 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 495 575 - -
Mibi12g2160 917 Gene3D KEN domain 788 917 IPR038357 -
Mibi12g2160 917 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 610 787 - -
Mibi12g2160 917 Pfam Ribonuclease 2-5A 791 917 IPR010513 GO:0004540|GO:0006397
Mibi12g2160 917 Pfam Protein kinase domain 505 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2160 917 CDD RNase_Ire1 789 917 - -
Mibi12g2160 917 ProSiteProfiles Protein kinase domain profile. 503 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2160 917 SMART PGNneu 850 904 - -
Mibi12g2160 917 Gene3D - 41 271 IPR015943 GO:0005515
Mibi12g2160 917 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 65 256 IPR011047 -
Mibi12g2160 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Mibi12g2160 917 Gene3D Transferase(Phosphotransferase) domain 1 603 787 - -
Mibi12g2160 917 SUPERFAMILY Protein kinase-like (PK-like) 498 799 IPR011009 -
Mibi12g2160 917 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 789 917 - -
Mibi12g2160 917 PANTHER IRE1-RELATED 142 917 IPR045133 GO:0004521|GO:0004674|GO:0030968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2160 Mibi-ChrMibi12 38074420 38079626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2160 527 784 MAP Kinase Kinase Kinase AT3G06030 29.008 6.15e-22 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Mibi12g2160 Pkinase 9.2e-40 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2160 12 38074420 38079626 Mibi12g2160 12 38074420 38079626 ECH