Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2158 ATGGCGGGGGTTTGGATTTTTGTGGTGTTGGTTCTTCTCTTCCACGGATCCTCTTTGACTGTGGCCGCCTCCACTCACTCAACATTACCCCATTCTGTAAACATTGGGGTTCTCTACTCTTTCAACACCACCGTCGGTCAAATTGTAAAGATTGCAATAGAAGCTGCTGTTCAAGACGTAAATTCTGATGCATCTATTCTTGGCGAAACCAAGCTCAAAGTCTCAATGCAAGAGGATTCCAAATACAGAGGCTTTCTGAGCATTGCTGAGGCCTTGCATCTCACTGCAAAACACACGGTGGCTATAATTGGGCCGCAAACCTCCGTCACAGCTCATGTTATATCTCAGATTGCAAACGAGCTCCAAGTTCCTCTGCTGTCAGTTTCAGCAACGGACCCCACACTGTCCTCGCTTCAGTTCCCATTCTTTGTGAGGACTTCTCACAGTGATGTGTATCAGATGAGCGCAATTGCGGAGCTTGTAGACCACTACGGGTGGAGGGAGGTTATAGCAATCTACAGTGACGACGATCATGGAAGGAATGGGATGAGTGTGTTGGGAGATAAGCTTGCGGAGAGAAGATGCAGGATCTCCTTCAAGGCTCCTATGAGCCCGGAAGCAAGTAGGGAGGAGATAACAAGCGTGCTTGTTCAGGTGGCTTTGGCAGAATCAAGGGTGATAGTGGTGCACGGCAACGCTGCCTGGGGGCGCGAGGTGTTCAGAGTGGCAAAATATCTGGAGATGATAGGATCCGGGTATGTTTGGATAACCTCTCATTTTCTCTCCACTCTTCTGGACGCATACGCTCCACTCCCTCTCCCTCACGACACCATGGAGGCCATTCAAGGGGTTCTCACGCTGCGTCTCCACACGCCTGACTCGGAGCTTAAGCGAAGGTTTGTTTCCAGGTGGAAAAACTTGACACATCATCATCAACACCTCGGACTCACTACTTACGCCCTCTATGCATACGATACTGTCCATGCCCTTGCACGTGCGCTTCATAGTTTCTTCCAACAAGGCAACCGAATAACATTCTCGTACGATCCCAAGTTGTCTGAGCTGCGCGGCAACAACGTCAATCTTGATACTCTGAGCATCTTCGATGGAGGGAAGGCGTTGAGAGACAGAATGTACGAGGTGGATATGGCAGGGGTAAGTGGGACCTTCAAGTATGCGTCTGATGGGAACCTCGTGAATCCGGCGTTCGAAATCCTGAACGTGATCGGGACAGGATGTAGGAGGATCGGTTACTGGAGTAACTACACGGGATTGTCAGTGGTTTCCCCGGAATTGCTGTATGCACACCCACCCAATCGTTCGGCGGCCAGTCAGAAGCTACGGCCGGTCATTTGGCCGGGGGACACGGCGCAGAAGCCTCGTGGTTGGGTGTTCCCAAGCACTGGGAGGCTGTTAAAAATTGGAGTGCCCGTGGGATTTAGCTACCGTCAATTCGTGTCACACGTACAGGGCACTGACATGTTCAAGGGCTTCTGCATCGACGTCTTTCTTGCCTCACTCAACTTGCTCCCTTATGGCGTCCCTTATAGGCTTGTTCCCTTTGGCAATGGTTCCAGCAATCCTAGTGCCAACGACCTTATTCGTCTCATCGCCGCCGGTGAATTTGATGGAGCAGTTGGTGACATCACGATCACAACGCAGCGAACCAGGATGGTGGATTTCACGCAGCCATTCATTGGGTCTGGTCTGGTGGTTGTGGCCCCCGTCAGGAAGTCAGACTCAAGTGCTTGGGCCTTTCTCAGACCCTTCAGTCCTCAGCTGTGGGCTGTCACCGCTGCCTTTTTCCTATCTGTTGGAGCTGTTGTTTGGATTTTGGAGCACAGATTCAATGATGAATTCCGCGGACCTCCCAGAAAACAACTTGTTACCGTTTTGTGGTTCAGTTTTTCGACCATGTTTTTCGCCCACAGGGAAAATACAGTGAGCACTCTGGGCCGATTTGTGCTTCTCATATGGCTATTTGTGGTGCTTATCATTAACTCGAGTTACACGGCGAGCCTGACATCGATCCTCACAGTGCAGCAGCTTGCTTCTCCCATCAAGGGCATTGAAACTTTAGTGGCCAGCAAAGATCCTATAGGGTATCTGCAGGGTTCATTCAGTAGGAACTATCTAACAGAAGAAATAGGAATTGATGAATCCAGACTTGTTCCTCTGAGGACGCCAGAAGAGTCTGCTAAAGCATTAAGAGATGGCCCCGAAAAGGGTGGCGTTGCTGCGTACGTGGATGAGCGTGCTTACGTTGAGCTCTTCCTTTCAAGCCGGTGTGACTTCACTATAGTAGGCCAAGAGTTCACCAGAAACGGTTGGGGATTTGCATTTCCACGAGACTCGCCTCTGGCGGTTGACTTGTCGACGGCTATATTGAAATTGGCAGAGAACGGAGATCTGCAGAGGATACATGACAAGTGGCTTCTAAATATAGCGTGCCTTTCACAGAATACAAAGTTCGAAGTGGACAGGCTTCGTCTGAAAAGCTTTTGGGGGCTCTATCTGGTATGCGGGGTGGCGTGCTTGCTTGCGTTGCTGCTATATCTCATAATGATGATGAGGCAGTACAAGAAGCACTACGTGGCAGAGGTTAAGTCATGTGGAGGTTCTTCTTCCAGCATTCGTACTTTCCTCACATTTGCAGACCAGAAAGAATCTGAAGTTAAGAGCCGATCCAAGAGGAGGCAAATGGAGAGGCTCTCTCACAGAAGTTCGACTGCTGAAGCCTGA 2742 0.5015 MAGVWIFVVLVLLFHGSSLTVAASTHSTLPHSVNIGVLYSFNTTVGQIVKIAIEAAVQDVNSDASILGETKLKVSMQEDSKYRGFLSIAEALHLTAKHTVAIIGPQTSVTAHVISQIANELQVPLLSVSATDPTLSSLQFPFFVRTSHSDVYQMSAIAELVDHYGWREVIAIYSDDDHGRNGMSVLGDKLAERRCRISFKAPMSPEASREEITSVLVQVALAESRVIVVHGNAAWGREVFRVAKYLEMIGSGYVWITSHFLSTLLDAYAPLPLPHDTMEAIQGVLTLRLHTPDSELKRRFVSRWKNLTHHHQHLGLTTYALYAYDTVHALARALHSFFQQGNRITFSYDPKLSELRGNNVNLDTLSIFDGGKALRDRMYEVDMAGVSGTFKYASDGNLVNPAFEILNVIGTGCRRIGYWSNYTGLSVVSPELLYAHPPNRSAASQKLRPVIWPGDTAQKPRGWVFPSTGRLLKIGVPVGFSYRQFVSHVQGTDMFKGFCIDVFLASLNLLPYGVPYRLVPFGNGSSNPSANDLIRLIAAGEFDGAVGDITITTQRTRMVDFTQPFIGSGLVVVAPVRKSDSSAWAFLRPFSPQLWAVTAAFFLSVGAVVWILEHRFNDEFRGPPRKQLVTVLWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLASPIKGIETLVASKDPIGYLQGSFSRNYLTEEIGIDESRLVPLRTPEESAKALRDGPEKGGVAAYVDERAYVELFLSSRCDFTIVGQEFTRNGWGFAFPRDSPLAVDLSTAILKLAENGDLQRIHDKWLLNIACLSQNTKFEVDRLRLKSFWGLYLVCGVACLLALLLYLIMMMRQYKKHYVAEVKSCGGSSSSIRTFLTFADQKESEVKSRSKRRQMERLSHRSSTAEA 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2158 913 CDD PBP1_GABAb_receptor_plant 34 428 IPR044440 -
Mibi12g2158 913 FunFam Glutamate receptor 583 713 - -
Mibi12g2158 913 Gene3D - 51 400 - -
Mibi12g2158 913 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Mibi12g2158 913 Gene3D - 758 819 - -
Mibi12g2158 913 Gene3D - 472 582 - -
Mibi12g2158 913 MobiDBLite consensus disorder prediction 892 913 - -
Mibi12g2158 913 SUPERFAMILY Periplasmic binding protein-like I 28 464 IPR028082 -
Mibi12g2158 913 CDD GluR_Plant 472 812 - -
Mibi12g2158 913 PRINTS Metabotropic glutamate GPCR signature 134 153 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mibi12g2158 913 PRINTS Metabotropic glutamate GPCR signature 153 169 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mibi12g2158 913 PRINTS Metabotropic glutamate GPCR signature 102 128 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mibi12g2158 913 PRINTS Metabotropic glutamate GPCR signature 169 186 IPR000337 GO:0004930|GO:0007186|GO:0016020
Mibi12g2158 913 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Mibi12g2158 913 PIRSF IGluLR_plant 3 913 IPR017103 -
Mibi12g2158 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 888 - -
Mibi12g2158 913 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Mibi12g2158 913 FunFam Glutamate receptor 709 816 - -
Mibi12g2158 913 FunFam Glutamate receptor 149 312 - -
Mibi12g2158 913 Pfam Bacterial extracellular solute-binding proteins, family 3 513 812 IPR001638 -
Mibi12g2158 913 Gene3D - 149 425 - -
Mibi12g2158 913 Gene3D - 583 708 - -
Mibi12g2158 913 SUPERFAMILY Periplasmic binding protein-like II 450 813 - -
Mibi12g2158 913 FunFam Glutamate receptor 467 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2158 Mibi-ChrMibi12 38070435 38073659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2158 7 910 Ion Channels AT3G51480 58.306 0.0 1112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2158 12 38070435 38073659 Mibi10g1702 10 38251493 38256529 CCT
Mibi12g2158 12 38070435 38073659 Mibi12g2158 12 38070435 38073659 ECH
Mibi10g1702 10 38251493 38256529 Mibi12g2158 12 38070435 38073659 ECH