LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi12g2148	ATGGATTCCGCAGGGGCCTCTTTGCTGACCACTCTTCTAGTCTTCCAGAACACCATTAAAGAAGAGTTGATCAGGAGCGTGCATGTCTACCGTCTGAGTGATGGGAGGGAAAGCGAGGTTGAAAGAGAGTTTGTATTTTCTCGGAGTGGCTCATACGGAGAAATGCAGGCTACCCCAATTCTTATATCACAGAAATTTCGTGTTCCCGAAGTTTCTGAAGGGTATCAGAATGGAGTCTGGCTCTGTGTCTTTGCGTTTCAGGCCGATCACAGGCCTCAGTTTTCCCGCCTTCCTCAGTTTTTATCAGTCACGAGGAACCTGAAGCTTCAGATGATCCCATCATTGCTTAATGATCTCCATATGATACATGAGTTGAACTGTAAACCAAAAGAGAATGATATGCTGCAAATCTCTCCTGATGAAAGATGCCAAGGAAGCAGCAATGATAGCCATCAGCCAAGAAAAATTTTGCTCCAGGATCTCAATTGTCTTCCTTATCCAGATGACATGCCTGAGTTACAAGACAAGGAAGTAGATGAAGAAAGTTTAGGCATGTCTGAGTTACCTGGAAATGAATCAGATGATGAAAGTATAGACTCCGTTGAGTTACCAGACAATGACATCATTGACCAAAGTTTTCCAGGTAACGTAGAGAAGAAAAAGAGGGCAGCTAGTAAAGATGTAGCAAGCATTGGTTTAACAGATCTGGTGAAATACTTTGATGTGCCTATTGTAGAAGCATCAAGAAATCTAAAAGTTGGACTTACTGTTCTAAAGAGGAAGTGCAGAGAATTTGGTATTCCACGCTGGCCTCATAGGAAGATTAAATCGCTTGACAATCTCATTCATGATCTTCAGGAAGTGGCAGAAAATGAAGAAATAGAGAATGATGCTGCTGTTAAGGCTGTGACAAAAAGGCAAAAGATGCTCGAGTGTGAAAAAGAAATTATTGAGAGGAAACCTTCCGTGGACATACAAAGAGAAACTAAGAGATTCAGGCAGGATGTCTTCAAGAGAAGGCACAGAGCTAGAGCCATGACAAAACAGAGCTCCAGTATCTACAACTCTTTGCACCTAAAGCTCAAAGAGTAA	1092	0.4212	MDSAGASLLTTLLVFQNTIKEELIRSVHVYRLSDGRESEVEREFVFSRSGSYGEMQATPILISQKFRVPEVSEGYQNGVWLCVFAFQADHRPQFSRLPQFLSVTRNLKLQMIPSLLNDLHMIHELNCKPKENDMLQISPDERCQGSSNDSHQPRKILLQDLNCLPYPDDMPELQDKEVDEESLGMSELPGNESDDESIDSVELPDNDIIDQSFPGNVEKKKRAASKDVASIGLTDLVKYFDVPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLQEVAENEEIENDAAVKAVTKRQKMLECEKEIIERKPSVDIQRETKRFRQDVFKRRHRARAMTKQSSSIYNSLHLKLKE	363

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi12g2148	363	MobiDBLite	consensus disorder prediction	177	199	-	-
	Mibi12g2148	363	Pfam	RWP-RK domain	231	278	IPR003035	-
	Mibi12g2148	363	ProSiteProfiles	RWP-RK domain profile.	213	298	IPR003035	-
	Mibi12g2148	363	Coils	Coil	275	302	-	-
	Mibi12g2148	363	PANTHER	PROTEIN RKD4	92	350	IPR044607	GO:0003700

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi12g2148	Mibi-ChrMibi12	37928397	37932427	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi12g2148	19	356	AtRKD Transcription Factor Family	AT4G35590	45.690	5.29e-87	264

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	RWP-RK	Mibi12g2148		RWP-RK	5.6e-20	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi12g2148	12	37928397	37932427	Mibi12g2148	12	37928397	37932427	ECH