Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2147 ATGGGTCTGTGCTTCGGGTCTCCCGCTCACGATGAAAGACCGGCGTCTAGTATTAACAGAAATACACATTCAGGTTCAGCTTCAGCTTCAGCTTCAGCGAGTTCTGACAGCAAGACCGTTGGGTTCTCTACCACGAACAGCAGTGCTGCGAAGAGTCAATTTTCAGAACTCGCTAGTGGGAACCTGGGGGATTCCCTTCCTGCCCCCAACGGCCAAATTCTAGAAACTCCTAACCTCAAGGTATTCACTTTTGGAGACTTGAAAGCGGCCACAAAGAACTTCAAATCCGATACATTGCTTGGTGAAGGTGGTTTTGGTAAAGTTTACAAAGGCTGGCTGGATGAGAAGACACTTACACCCTCTAAGGCAGGGTCTGGGATTGTGGTTGCTATTAAAAAACTGAACTCTGAAAGTTTGCAAGGATTCCAAGAGTGGCAGTCAGAAGTTAATTTCTTAGGAAGGCTTTCTCATCCCAACTTGGTCAAGCTATTGGGTTACTGTTGGGATGCTGAGGAGCTGCTGCTTGTGTATGAGTTCATGCCAAAGGGAAGTTTAGAGAATCATCTCTTCAGAAGAAATCCCAACATCCAACCACTTTCTTGGAACATGCGACTCAAAATAACTATTGGTGCAGCTCGAGGCCTGGCATTCTTGCACACTTCAGAAAAGCAAGTGATATACCGAGATTTCAAGGCCTCAAATATACTACTTGATGGGAATTATAATGCAAAAATTTCTGACTTTGGGTTGGCGAAATTGGGGCCATCAATGGGTGAATCACATGTTACAACTAGGGTTATGGGCACTTATGGCTATGCCGCTCCTGAATATGTTGCAACAGGGCACTTGTATGTTAAGAGCGACGTTTATGGATTTGGCGTAGTGCTGCTTGAAATGCTGACAGGCTTGAGGGCACTTGATACGAAGCGGCCTAGTGGGCAGCAGAATCTGGTTGAATGGTTGAAGCCGTATCTGTCCAGCAAGAGGAAGTTGAAAACCATTATGGACGCTAGGATTCAGGGTCAGTATTCACTCAAGGCAGCATCACAGGCAGCTAAGCTTACACTCAAATGCCTACAACCTGACCCTAAACACCGTCCTTCCATGAAAGAAGTTGTTGAGGAATTGGAAGGCATTGAAGAATCAAAGACAAAGTAA 1158 0.456 MGLCFGSPAHDERPASSINRNTHSGSASASASASSDSKTVGFSTTNSSAAKSQFSELASGNLGDSLPAPNGQILETPNLKVFTFGDLKAATKNFKSDTLLGEGGFGKVYKGWLDEKTLTPSKAGSGIVVAIKKLNSESLQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDAEELLLVYEFMPKGSLENHLFRRNPNIQPLSWNMRLKITIGAARGLAFLHTSEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPSMGESHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPSGQQNLVEWLKPYLSSKRKLKTIMDARIQGQYSLKAASQAAKLTLKCLQPDPKHRPSMKEVVEELEGIEESKTK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2147 385 ProSiteProfiles Protein kinase domain profile. 94 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2147 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Mibi12g2147 385 ProSitePatterns Protein kinases ATP-binding region signature. 100 133 IPR017441 GO:0005524
Mibi12g2147 385 Gene3D Phosphorylase Kinase; domain 1 78 179 - -
Mibi12g2147 385 FunFam Serine/threonine-protein kinase PBS1 180 385 - -
Mibi12g2147 385 Pfam Protein tyrosine and serine/threonine kinase 97 376 IPR001245 GO:0004672|GO:0006468
Mibi12g2147 385 MobiDBLite consensus disorder prediction 14 42 - -
Mibi12g2147 385 CDD STKc_IRAK 100 379 - -
Mibi12g2147 385 Gene3D Transferase(Phosphotransferase) domain 1 180 385 - -
Mibi12g2147 385 FunFam Serine/threonine-protein kinase BIK1 64 179 - -
Mibi12g2147 385 PANTHER OS01G0588500 PROTEIN-RELATED 39 380 - -
Mibi12g2147 385 MobiDBLite consensus disorder prediction 1 42 - -
Mibi12g2147 385 SUPERFAMILY Protein kinase-like (PK-like) 72 377 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2147 Mibi-ChrMibi12 37917817 37922999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2147 80 376 Glycoside Hydrolase AT3G07070 51.007 1.29e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi12g2147 PK_Tyr_Ser-Thr 7e-49 CL0016