Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2123 ATGGCCGACGATGTTCCCGACAGAGTGATGTATCTTCACGGGGATCTGGACTTGAAAATTGTGGAGGCTCGAATGTTGCCCAACATGGACATTGTATCAGAGCGCTTCCGCCGCTGCATCACCGCATGTGATACCATCAAATTCCATTCATCAGATCCAGCCGCCCACCGCAAAACCCACCAGCACACCAAGATCATTACCAGCGACCCTTACGTGACCGTTTCGCTCCCACAGGCCACTGTTGCCCGTACACGTGTCCTCAAGAATTCTCAAAATCCTCACTGGGACGAGCACTTTAACATCCCCTTGGCTCACCCCGTCGCAGATTTGGAATTCCGCGTCAAAGATGACGACATTTTTGGCGCCCAAGTCATCGGAACTGTCAAAATTCCCGCCCAGACGGTTGCTTCAGGTGAACTTATCAGTGGGTGGTTCCCAATTCTTGGATCCAACGGTCAACCACCCAAACCGGACGCCGCTCTTCTTATTGAAATGAAGTTCACACCGGTTGAGAAGAACACTCTGTATCGTCGCGGCATTGCGAACGACCCTGAGCACAAGGGTGTGAGACATGCGTATTTTCCGTTGAGGAAAGCTAACTCCGTGAGGCTGTACCAAGATGCTCATGTTCCTCAAGGATTGCTGCCTAAGATTGAGCTAGAGGGAGGGAAGGTTTATAGGCAGGGGACGTGTTGGGAAGATATTTGTTATGCTATATCTGAGGCACATCATATGATATATCTCGTGGGCTGGTCAATCTACCACAAGATCAAACTGGTTAGGGAGCCCTCCAGACAATTGCCACGAGGTGGGGATTTAACTCTTGGTGACCTCCTCAAATACAAGTCTCAAGAAGGGGTTCGAGTTCTCTTACTGGTCTGGGATGATAAAACTTCCCACGATAAGCTGTTCTTCAAGTCGGCTGGAATTATGCAGACACATGATGAGGAGACCAAAAAGTTCTTTAAGCACTCTTCCGTCATGTGTGTATTGGCACCTCGGTATGCTAGCAGCAAGTTGAGTATTATAAAGCAACAGATTGTTGGAACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACACAGGCTTCTGGTAATGATCGGAAAATAACTGCTTTTTTAGGAGGGCTTGATCTATGTGATGGTCGCTACGACACACCTGAGCATAGACTTCTTCGTGATCTTGATTCTGTATTTTCAGGGGACTTTCACAATCCTACACTTCCTGCTGACAAGAGGGCGCCGAGGCAACCATGGCATGATTGGCATTGCAGAATTGATGGGCCTGCTGCATATGATGTTCTTATTAATTTTGAGCAGCGTTGGAGAAGAGCAACCAGATGGAAAGAGTTTGCAATGCGTGTAAAAAAGGCATCTCAGTGGCATGAGGATGCTTTGATAAAAATAGATCGCATATCCTGGATATTAAGTCCTGATGTGCCTCCTTCAAAGGATGGTGTCACAATTGTACCTGGAGATGACCCTAAAGTGTGGATTTCCAGTGAGGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCCTGAAAGGGTTTCCAAAAAATGTTCATACCGCCCAGTCTCAGAATCTTACCTGCGCTAAAAATGTAGTAATAGATAAAAGCATTCAAACAGGATACATCCAGGCAATCAGATCTGCTCAACATTTTATTTACATAGAAAACCAATACTTTATCGGATCGTCTTTTGCATGGCCATCTTATAAAGATGCAGGAGCTGATAATCTTATCCCAATGGAATTGGCGCTGAAAATTGCTAATAAAATCAGAGCCAATGAAAGATTTGCGGTGTATGTTATTTTACCAATGTGGCCTGAAGGTGATCCTAATTCCGGAGCTATGCAAGAAATTCTGTTTTGGCAGAGTCAGACAATGCAGGCGATGTATAAGGTTGTGGCTGAAGAATTGAAATCAATGCAACTTACTGACTCGCATCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAGGAGTCTCATGAAGATGCCTCAAACTCTAATGACGCTGCTGTCACCGATTCGTATAAATACGGTCGCTTTATGATTTATGTACATGCTAAGGGGATGATAGTTGATGATGAGTATGTGATAGTGGGGTCTGCTAATATAAATCAAAGATCTATGGCTGGTTCAAAAGATACAGAGATAGCAATGGGTGCATACCAACCTCATCACACTTGGTCTGCAAGGAAAAGGCATCCCTATGGCCAGATTTATGGGTACAGAATGTCACTGTGGAGTGAGCATCTTGGACTTGAAAAGATAGAAACATGTTTCAAGGAACCAGGGAGCTTGGAATGTGTCAATAAAGTGAATGAAATTGCTAAGGAAAACTGGAGCAAGTTCACTTCTGAGAGCTTCTCAAAGCTGCAGGGGCATTTGCTCAAGTATCCTGTACAGGTAGATGCTGATGGAAATGTAAGCTCACTATCCGGGCACGAGACTTTCCCGGATGTTGGCGGTAGAGTACTGGGGGTTCACTCCCAAACAATTCCAGATATCCTAACGACGTAA 2562 0.4528 MADDVPDRVMYLHGDLDLKIVEARMLPNMDIVSERFRRCITACDTIKFHSSDPAAHRKTHQHTKIITSDPYVTVSLPQATVARTRVLKNSQNPHWDEHFNIPLAHPVADLEFRVKDDDIFGAQVIGTVKIPAQTVASGELISGWFPILGSNGQPPKPDAALLIEMKFTPVEKNTLYRRGIANDPEHKGVRHAYFPLRKANSVRLYQDAHVPQGLLPKIELEGGKVYRQGTCWEDICYAISEAHHMIYLVGWSIYHKIKLVREPSRQLPRGGDLTLGDLLKYKSQEGVRVLLLVWDDKTSHDKLFFKSAGIMQTHDEETKKFFKHSSVMCVLAPRYASSKLSIIKQQIVGTVFTHHQKCVIVDTQASGNDRKITAFLGGLDLCDGRYDTPEHRLLRDLDSVFSGDFHNPTLPADKRAPRQPWHDWHCRIDGPAAYDVLINFEQRWRRATRWKEFAMRVKKASQWHEDALIKIDRISWILSPDVPPSKDGVTIVPGDDPKVWISSEDDPENWHVQIFRSIDSGSLKGFPKNVHTAQSQNLTCAKNVVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSFAWPSYKDAGADNLIPMELALKIANKIRANERFAVYVILPMWPEGDPNSGAMQEILFWQSQTMQAMYKVVAEELKSMQLTDSHPQDYLNFYCLGNREESHEDASNSNDAAVTDSYKYGRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGSKDTEIAMGAYQPHHTWSARKRHPYGQIYGYRMSLWSEHLGLEKIETCFKEPGSLECVNKVNEIAKENWSKFTSESFSKLQGHLLKYPVQVDADGNVSSLSGHETFPDVGGRVLGVHSQTIPDILTT 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2123 853 Pfam C2 domain 14 147 IPR000008 -
Mibi12g2123 853 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Mibi12g2123 853 Pfam Phospholipase D Active site motif 350 385 IPR001736 GO:0003824
Mibi12g2123 853 CDD C2_plant_PLD 9 168 - -
Mibi12g2123 853 Pfam Phospholipase D C terminal 773 842 IPR024632 -
Mibi12g2123 853 Gene3D C2 domain 13 178 IPR035892 -
Mibi12g2123 853 SMART C2_3c 15 144 IPR000008 -
Mibi12g2123 853 PANTHER PHOSPHOLIPASE D 7 841 IPR015679 -
Mibi12g2123 853 PIRSF PLD_plant 1 853 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mibi12g2123 853 Pfam PLD-like domain 555 733 IPR025202 -
Mibi12g2123 853 SUPERFAMILY Phospholipase D/nuclease 190 454 - -
Mibi12g2123 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 350 385 IPR001736 GO:0003824
Mibi12g2123 853 SUPERFAMILY Phospholipase D/nuclease 548 743 - -
Mibi12g2123 853 FunFam Phospholipase D delta 222 466 - -
Mibi12g2123 853 Gene3D Endonuclease Chain A 498 747 - -
Mibi12g2123 853 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 696 723 IPR001736 GO:0003824
Mibi12g2123 853 Gene3D Endonuclease Chain A 221 471 - -
Mibi12g2123 853 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 170 IPR035892 -
Mibi12g2123 853 SMART pld_4 696 723 IPR001736 GO:0003824
Mibi12g2123 853 SMART pld_4 350 385 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2123 Mibi-ChrMibi12 37627726 37635952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2123 1 687 Phospholipase D Gene Family (Wang group) AT4G35790 69.684 0.0 1033