Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2117 ATGGAGCACACACCTGAGGCTGAGGGGCTGAGGCGCACGCCTATTTCTGAGAAGAAACTTCTTACTATACCTTTCTCCCTTCGTCAGTCGTCACCGTGTCTCATCCATCGTACCTCTGTTTCTTCGATTCCTCTGAGTTCTCAAATCCTGATGGATTTTGTGGCGATTCCTTTTCCCTTCCCTTCTTCCCTGCCGGGCTCCTTCGGGTGCTTCATTGACAGGGTTAGGCGCATGAGCACCCTCGCCGTTTCTGTTATAATTGGAAACATCTTCTCTGCCATCTTGACATTTTGCTTTGCCTTAGTGGGAACATTATTGGGTGCCATGACAGGAGCTTTGATAGGACAAGAGACTGAGAGTGGCTTCATTAGAGGAGCAGCGGTTGGTGCCATATCCGGAGCTGTTTTCTCCATTGAAGTGTTTGAATCTTCTCTTGTTCTCTGGCAATCTGATGAATCTGGGATTGGGTGTCTCTTATATCTGATTGATGTCATAGCTAGCCTACTGAGTGGGAGACTTGTGCGTGAGAGGATTGGCCCTGCTATGTTAAGTGCTGTCCAAAGTCAGATGGGTGCAGTTGAAACAAACTTTGAGGAGGTTCAAAACATCTTTGACACTGGTGGTTGCAAGGGTTTAACAGGGGATTCTGTTGAGAAGATCCCAAAGATCACAATCACAAATGATAATATCATTGATGCTTCGGGTGAAAGAGTTTCTTGTTCAGTCTGCCTCCAGGACTTTCAGCCTGGTGAGACAGTTAGAAGTTTGCCTCATTGTCATCACATGTTCCACCTACCATGCATAGATAAGTGGCTCTTCAGGCACGGTTCATGTCCGTTATGCAGGAGGGATCTGTAA 858 0.4685 MEHTPEAEGLRRTPISEKKLLTIPFSLRQSSPCLIHRTSVSSIPLSSQILMDFVAIPFPFPSSLPGSFGCFIDRVRRMSTLAVSVIIGNIFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETNFEEVQNIFDTGGCKGLTGDSVEKIPKITITNDNIIDASGERVSCSVCLQDFQPGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2117 285 CDD RING-H2_PA-TM-RING 240 282 - -
Mibi12g2117 285 FunFam NEP1-interacting protein-like 1 200 285 - -
Mibi12g2117 285 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 204 285 IPR013083 -
Mibi12g2117 285 SUPERFAMILY RING/U-box 239 285 - -
Mibi12g2117 285 ProSiteProfiles Zinc finger RING-type profile. 240 282 IPR001841 -
Mibi12g2117 285 Pfam Ring finger domain 239 282 IPR001841 -
Mibi12g2117 285 SMART ring_2 240 281 IPR001841 -
Mibi12g2117 285 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 73 284 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2117 Mibi-ChrMibi12 37566344 37568254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2117 72 285 C3H Transcription Factor Family AT5G66070 78.505 2.92e-118 337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2117 12 37566344 37568254 Mibi10g1780 10 39139083 39141721 CCT