Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2091 ATGAGGTCTGTAACCTGGGCCCTCTTTTCTAGCCGCAAGGCACTCAACTCAATAACTATCAATTACAGAAACGGCTTTGTTCAGGCATTCCACAGAGATCTTAAGGATAACAATACATTTTACATCTACTCTGATCTTGCAAACTACTCCATAGGTGCTAGTGTTGCTAATGAGATGAAATCACTCTCAACACATCAAGCTTGGAATGATGAAGCCATTCGTGGTAACAGTTCAGCGATCTGGTATCGCGAACCACTTGACCCGATTAGTGGTCTGAAGATTGGAAAAGCTAAGAAGATTGCACCAGAAGACTTGATTAATATTGCTGGCATTTCTCAAGTTCCTGATGGGGCAGCTTCATGGCATGTTGCTGTGAGCAAGTTCACGGATTCGCCATTGCTTTCTGCTGCGCTGCCAGTTTGGGACTCTTCCAATAAGAGCATTGTCGCAGTTGTGGGTGTCACAACTGCACTTTATAGTGTTGGCCAGCTAATGAAAGAATTAGTTGAATTTCATAGTGGTTATATCTATTTGACCTCCTTAGAGGGTTACTTACTTGCCACTTCCACAAATGCTTCACTCCTAACATATTCAAAGCCTCTCAAGCTTAAGATGGCTGTTGATTGTGAAGATGATGTGATACGATCGGGAGCCCAGTGGCTGCAGAGAACCTATGGGAAGAATTTTCCTCCAAGTCATGGGGTTCATGTAGAGAATGTCAAGCTAGGAGATCAACAGTATTACATCGACTCGTTCTTTTTAAATTTGAAGAGGCTTCCACTGGTGGGTGTTATCATTATTCCAAGAAAGTATATTATGGGGAAGGTTGATCAGAGAGCCTTTAAAACATTGGTTATTCTGATATCAGCGTCGTTGTGCATTCTAGTCATTGGATGTGTTTGCATTTTAATTCTGACAAACGGGGTGTCAAAGGAAATGAACCTAAGAGCAGAACTAATCAGTCATTTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAGTTTCTTGCAAACATGAGTCATGAATTGAGGACACCTATGGCAGCGGTGATTGGGTTGCTTGACATTCTTATATCCGATGATTGTCTAACAAATGAACAATATGCAACAGTAACACAGATAAGAAAATGCTCAACTGCATTACTCCGTCTTCTTAACAACATATTGGATATCAGCAAGGTGGAATCCGGAAAGTTAGTGTTAGAAAACGCAGAATTTGACTTGGGAAGGGAACTTGAAGGGCTTGTGGATATGTTTTCTGTTCAGTGCATTAACCATAACGTAGAGACTGTTTTGGACCTTTCAGATGATATGCCAAAGCTAGTTCTGGGTGATTCTGCAAGGGTTGTTCAAATCTTTGCAAATTTGATCAACAATTCAATCAAGTTTACTCCATCTGGTCACATTATTCTCCGAGGATGGTGTGAGAACCCAAATTATTCCAGCGATAGCCGAAATCCTCCTCTCAATCAGAAGTCCCAGGCTCCGCAAAAGACTAGAATGAAGCAACAAGAAAACCATGCAAAGAAGGCATCTAAAAAAGACAACCGAATAATTCTTTGGTTTGAAGTAGATGACACAGGCTGTGGTATTGATCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCAGATCCATCAACCACTAGATTGCACGGAGGCACTGGTCTTGGACTTTGCATTGTGAGAACCTTGGTCAAAAAGATGGGTGGAGAAATCAAGGTTGTCAAGAAGGAAGGCCCAGGAACCCTGATGCGATTGTACCTGCTTCTCAATACACCTATGGACGCCACAGAACAACATTGTAAAATAGATTATGCTGAGAATGGCATAGTTGTATTGCTTGCACTGCACGGAGACACAGGTAGATCTATCACATCTAAATGGCTACAGAAAAACGGGGTTTGCGCTCTAGAGGCATCTGAATGGAATGAACTGACGCAAATTCTGAGGGAACTCTTCCATGCAAGTTTGGTCCACCATAATGGCTTTGATGCACATTATGCAGTAAATAAGAGTTGGAAGTCCAAATTACTCAACATAGAAGAAACGAGGAATCCAGCATTTGTCATTATAGTGGACATAGGGCTGCTTGATTTGAGCACAGATATATGGAAGGAACAACTCAACTTTCTTCACAAGTACTTTGGGAGAGCAAAATTCGCATGGGTGCTAAATCATGACACCTCTAATACCATAAAGATGGAGCTTCGCAGGAAAGGGCATATATTGATGGTCAACAAGCCCCTCTATAAAACCAAAATGTTTCATATTCTGGAAGTTGTCATAAAGGAGAGAAATCTTGAGCTGCAAAAGAGAAATATGACTGCTTCAAGAACCACAGTTAAAGAGGGTGATGCACATGAGTTTCTGGAGATTGATTCTACTCATTTTGATGGTGGTAGCTCTGATGGTTCTGACATATCCGAAATGTGTTCTTCTAATAGTGCCAATGGAGAAAAACGAAGGGAAAAAATTGTAGATTCCCTTCCACCATCACAGTACAACAAAAACAATTACTTCGTTGGATTAACCGATGAATACACAGAAGAAAACATTTCAATGAAAGAAGAATCCTGCAAGAGTAGCCCCAACTGCTGTGACATCCCTGAAGACACGGGACCAAAATTACAAGCATCCTTTCCAGCAGAAGCTCAAGGAAAGGATTCTGGTCCCGGGAAAACATTTAGTGTCACTTGCTCAAGCAAAACTGTAAATGGAAAAAAATCTCTTGAAGGTCTGAGGATATTGCTTGCAGAAGACACTCCAGTACTTCAAAGAGTTGCGACCATAATGTTGGAAAAAATGGGAGCCACAGTTGTTGCAGTAGGTGATGGACAGCAGGCTGTGGATGCTCTGAATTGCATGCTTGGCACTGAAGATAGTAGAAGGGAGTCTCTGATGAAGGAGAGGAGCACAATATCTCAAACAGAAATTATCAGTTGTACACCTTATGATTTGGTCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAGGCGACGAAAGCTATCAGGAAAGCAGAAGCAGGAACTGGCTCGCACATTCCTATAGTTGCTCTTACAGCACATGCAATGTCATGTGATGAGGCTAAGTGCCTGGAGGTGGGCATGGATGCTTATCTAACAAAGCCAATTGACTTCAAGCTGATGGTGTCAACCATACTTTCACTCACTAAGACAACTTCATGA 3213 0.4177 MRSVTWALFSSRKALNSITINYRNGFVQAFHRDLKDNNTFYIYSDLANYSIGASVANEMKSLSTHQAWNDEAIRGNSSAIWYREPLDPISGLKIGKAKKIAPEDLINIAGISQVPDGAASWHVAVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVEFHSGYIYLTSLEGYLLATSTNASLLTYSKPLKLKMAVDCEDDVIRSGAQWLQRTYGKNFPPSHGVHVENVKLGDQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDQRAFKTLVILISASLCILVIGCVCILILTNGVSKEMNLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVTQIRKCSTALLRLLNNILDISKVESGKLVLENAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVLGDSARVVQIFANLINNSIKFTPSGHIILRGWCENPNYSSDSRNPPLNQKSQAPQKTRMKQQENHAKKASKKDNRIILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVKKMGGEIKVVKKEGPGTLMRLYLLLNTPMDATEQHCKIDYAENGIVVLLALHGDTGRSITSKWLQKNGVCALEASEWNELTQILRELFHASLVHHNGFDAHYAVNKSWKSKLLNIEETRNPAFVIIVDIGLLDLSTDIWKEQLNFLHKYFGRAKFAWVLNHDTSNTIKMELRRKGHILMVNKPLYKTKMFHILEVVIKERNLELQKRNMTASRTTVKEGDAHEFLEIDSTHFDGGSSDGSDISEMCSSNSANGEKRREKIVDSLPPSQYNKNNYFVGLTDEYTEENISMKEESCKSSPNCCDIPEDTGPKLQASFPAEAQGKDSGPGKTFSVTCSSKTVNGKKSLEGLRILLAEDTPVLQRVATIMLEKMGATVVAVGDGQQAVDALNCMLGTEDSRRESLMKERSTISQTEIISCTPYDLVLMDCQMPKMDGYEATKAIRKAEAGTGSHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTKTTS 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2091 1070 FunFam Histidine kinase 1-like protein 323 402 - -
Mibi12g2091 1070 Gene3D - 323 402 - -
Mibi12g2091 1070 MobiDBLite consensus disorder prediction 485 505 - -
Mibi12g2091 1070 Pfam Response regulator receiver domain 922 1061 IPR001789 GO:0000160
Mibi12g2091 1070 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 322 402 IPR036097 GO:0000155|GO:0007165
Mibi12g2091 1070 Gene3D - 403 600 IPR036890 -
Mibi12g2091 1070 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 448 597 IPR003594 -
Mibi12g2091 1070 MobiDBLite consensus disorder prediction 485 516 - -
Mibi12g2091 1070 SUPERFAMILY CheY-like 918 1066 IPR011006 -
Mibi12g2091 1070 SMART HKATPase_4 448 599 IPR003594 -
Mibi12g2091 1070 MobiDBLite consensus disorder prediction 806 822 - -
Mibi12g2091 1070 ProSiteProfiles Response regulatory domain profile. 921 1066 IPR001789 GO:0000160
Mibi12g2091 1070 MobiDBLite consensus disorder prediction 806 826 - -
Mibi12g2091 1070 CDD HisKA 336 397 IPR003661 GO:0000155|GO:0007165
Mibi12g2091 1070 SMART HisKA_10 335 401 IPR003661 GO:0000155|GO:0007165
Mibi12g2091 1070 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 390 595 IPR036890 -
Mibi12g2091 1070 PRINTS Bacterial sensor protein C-terminal signature 559 577 IPR004358 GO:0016310|GO:0016772
Mibi12g2091 1070 PRINTS Bacterial sensor protein C-terminal signature 524 538 IPR004358 GO:0016310|GO:0016772
Mibi12g2091 1070 PRINTS Bacterial sensor protein C-terminal signature 542 552 IPR004358 GO:0016310|GO:0016772
Mibi12g2091 1070 SMART REC_2 920 1062 IPR001789 GO:0000160
Mibi12g2091 1070 Pfam His Kinase A (phospho-acceptor) domain 336 401 IPR003661 GO:0000155|GO:0007165
Mibi12g2091 1070 CDD REC_hyHK_CKI1_RcsC-like 922 1062 - -
Mibi12g2091 1070 ProSiteProfiles Histidine kinase domain profile. 342 599 IPR005467 -
Mibi12g2091 1070 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 606 - -
Mibi12g2091 1070 Gene3D - 903 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2091 Mibi-ChrMibi12 37383071 37389458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2091 1 1070 Histidine Kinase Gene Family AT2G17820 64.830 0.0 1370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi12g2091 HATPase_c 2.1e-22 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2091 12 37383071 37389458 Mibi12g2091 12 37383071 37389458 ECH