Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2077 ATGAAGTTAGATATAACATGGCAACAAGAAGCACTTTATAAGAAACATGAAAGTGTGCGTGGTTTAATGGTAAAGTGCAATGGATTGGGGGAAGAAAAGGAGGATCACGCACGCAAAGTGTGGAGACAAAGCATGTGCCATCTGGTAGAGTGGCCAAATCCCTCTTCCATCATATCTCCATCCAATGTTCAGGCTCTCCTCCGCCCAATCCTCGCCCTATCAATACGACACCGTATGATGCTCCCTCTCTCTCCCCCTTCCCCTTCCCCCCTTCCCGCCATCGCTTTCTCCGGCAACTCTCTTCCCTCTTCGCCGCCGCAGTCGCCTCACCGCCTCCCACTGCGGCCAGCCGCCGCCGCCGCAGAATCTTGCTCCACTTGGACGGACCAAGCGAAATCGAACTCCTCCTATCTCACCTCGCTTACTATGTCTTCCTTCACTTCCCTGTATGAGATTTTAGGGATTCCGGCCGGAGCCTCCCATCAAGAAATTAAAGCTGCCTACCGGCGATTGGCTAGGGTTTGCCATCCCGATGTGGCGGCGATGCATCGGAAGGATTCTTCGGCCGACGACTTCATGAAGATTCACGCCGCCTATTCCACTCTGTCGGATCCTCAGAAGCGAGCCACTTACGATAGGAGCCTCTTCGTCCGCCGTCAGAGGCCTTTGTCCACCTCGTCCTCGTTCTCCGGCTACGGTGGCCGGAACTGGGAAACGGACCAGTGCTGGTAG 732 0.5492 MKLDITWQQEALYKKHESVRGLMVKCNGLGEEKEDHARKVWRQSMCHLVEWPNPSSIISPSNVQALLRPILALSIRHRMMLPLSPPSPSPLPAIAFSGNSLPSSPPQSPHRLPLRPAAAAAESCSTWTDQAKSNSSYLTSLTMSSFTSLYEILGIPAGASHQEIKAAYRRLARVCHPDVAAMHRKDSSADDFMKIHAAYSTLSDPQKRATYDRSLFVRRQRPLSTSSSFSGYGGRNWETDQCW 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2077 243 CDD DnaJ 150 204 IPR001623 -
Mibi12g2077 243 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 107 243 - -
Mibi12g2077 243 ProSitePatterns Nt-dnaJ domain signature. 192 211 IPR018253 -
Mibi12g2077 243 PRINTS DnaJ domain signature 168 183 IPR001623 -
Mibi12g2077 243 PRINTS DnaJ domain signature 187 207 IPR001623 -
Mibi12g2077 243 PRINTS DnaJ domain signature 150 168 IPR001623 -
Mibi12g2077 243 SUPERFAMILY Chaperone J-domain 142 218 IPR036869 -
Mibi12g2077 243 Pfam DnaJ domain 149 212 IPR001623 -
Mibi12g2077 243 ProSiteProfiles dnaJ domain profile. 148 215 IPR001623 -
Mibi12g2077 243 Gene3D DnaJ domain 135 230 IPR036869 -
Mibi12g2077 243 SMART dnaj_3 147 207 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2077 Mibi-ChrMibi12 37264093 37265246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2077 150 212 C2H2 Transcription Factor Family AT1G74250 43.284 6.12e-08 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2077 12 37264093 37265246 Mibi12g2077 12 37264093 37265246 ECH