Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2074 ATGGGTAGCTGCTTCTCTTCCACCAAAGTCAGTGGCTCCAACAGCAATTCCACGGCCAACGCCAACGCCGCCCACCACAATCGCAAAGACACTCCCAAGCCTCAAAGCCGTACAACCACCGTTAAGCCTCAAGCGACCAACCATCAACGGCCAAAACTACCTGATGAGATCCGTAACAAGAATTCCCAGCAGCCTAAGCCTAAAGACAAGCAGAGTTCCAAGCGCCAGCCGTGCGGTAAACGCACCGATTTTGGATATGAGAAGGATTTCGATTCGCGTTACTCGCTCGGGAAATTGCTTGGACATGGTCAATTTGGTTACACGTATGTTGGAGTGGACCTTGCGAATGGGGATCGGGTGGCTGTGAAGAGAATTGACAAGAGCAAGATGATTCTTCCGATTGCAGTTGAGGATGTTAAGCGGGAGGTCAAGATTTTGAAAGAACTAACAGGCCATGAGAATGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATATGTATATATTGTTATGGAGTTATGCGAGGGTGGCGAACTTTTAGATCGTATATTGGCCAAGAAAGACAGCCGATATACAGAAAAAGATGCAGCAGTGATTGTGAGGCAGATGCTCAAAGTTGCAGCTGAGTGCCATTTGCATGGTTTGGTCCACCGGGACATGAAACCAGAGAATTTTCTATTCAAATCAGCTAAGGCAGATTCACCTTTGAAGGCTACAGATTTTGGTTTGTCAGATTTTATTAAACCTGGAAAGAAATTTCATGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTGAAGCGCAAGTCAGGGCCAGAATCAGATGTATGGAGTATTGGTGTAATTACATACATATTGCTTTGTGGGAGGCGCCCATTTTGGGATAAGACAGAGGATGGTATCTTTAAGGAGGTATTGCGTAACAAGCCTGACTTCCGGCGGAAGCCATGGCCATCTATAAGCAATGCTGCGAAAGATTTTGTAAAGAAATTGCTAGTAAAGGATCCTCGGACTAGATTAACTGCTGCTCAGGCTCTATCTCATCCATGGGTTAGGGAAGGAGGAGAGGCATCAGAGATTCCTATTGACATATCTGTCCTAAGCAACATGCGGCAATTTGTGAAATTTAGTAGGTTGAAACAATTTGCACTCAGGGCACTAGCTAGTACACTTAATGAAGAAGAGTTGGCTAATCTCAGAGATCAGTTTGATGCAATTGATGTGGACAAAAGTGGTGCTATTAGTCTAGAAGAGATGAGACATGCTCTTGCTAAGGATATCCCTTGGAAGTTGAAAGATTCCCGCGTTCTTGAGATATTACAAGCGATAGATAGCAACACAGATGGGCTTGTGGATTTCTCTGAGTTTGTGGCTGCTACATTTCATGTACATCAATTGGAGGAGCATGACTCAGAAAAGTGGCTTCACCGGTCACAAGCTGCTTTTGAGAAATTTGATATAGACAAGGATGGCTATATTACTCCAGAAGAACTTAGAATGCATACTGGCTTACGAGGATCCATTGATTCGCTACTTGAGGAAGCTGATATTGACAAAGATGGAAAAATCAGCCTCCCAGAGTTTCGAAGACTCCTAAGAACTGCAAGCATTAGTTCACATACCGTGACAACCCCACGAGGATGTTAG 1656 0.442 MGSCFSSTKVSGSNSNSTANANAAHHNRKDTPKPQSRTTTVKPQATNHQRPKLPDEIRNKNSQQPKPKDKQSSKRQPCGKRTDFGYEKDFDSRYSLGKLLGHGQFGYTYVGVDLANGDRVAVKRIDKSKMILPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVIVRQMLKVAAECHLHGLVHRDMKPENFLFKSAKADSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNAAKDFVKKLLVKDPRTRLTAAQALSHPWVREGGEASEIPIDISVLSNMRQFVKFSRLKQFALRALASTLNEEELANLRDQFDAIDVDKSGAISLEEMRHALAKDIPWKLKDSRVLEILQAIDSNTDGLVDFSEFVAATFHVHQLEEHDSEKWLHRSQAAFEKFDIDKDGYITPEELRMHTGLRGSIDSLLEEADIDKDGKISLPEFRRLLRTASISSHTVTTPRGC 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2074 551 Pfam EF-hand domain pair 483 535 IPR002048 GO:0005509
Mibi12g2074 551 Pfam EF-hand domain pair 401 462 IPR002048 GO:0005509
Mibi12g2074 551 ProSitePatterns EF-hand calcium-binding domain. 489 501 IPR018247 -
Mibi12g2074 551 Gene3D Transferase(Phosphotransferase) domain 1 180 375 - -
Mibi12g2074 551 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Mibi12g2074 551 MobiDBLite consensus disorder prediction 1 25 - -
Mibi12g2074 551 ProSiteProfiles EF-hand calcium-binding domain profile. 476 511 IPR002048 GO:0005509
Mibi12g2074 551 FunFam calcium-dependent protein kinase 28-like 180 373 - -
Mibi12g2074 551 ProSiteProfiles Protein kinase domain profile. 94 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2074 551 CDD STKc_CAMK 93 353 - -
Mibi12g2074 551 SUPERFAMILY EF-hand 386 538 IPR011992 -
Mibi12g2074 551 PANTHER SERINE/THREONINE-PROTEIN KINASE 72 523 - -
Mibi12g2074 551 Gene3D - 395 464 - -
Mibi12g2074 551 ProSiteProfiles EF-hand calcium-binding domain profile. 512 541 IPR002048 GO:0005509
Mibi12g2074 551 SMART efh_1 480 508 IPR002048 GO:0005509
Mibi12g2074 551 SMART efh_1 510 538 IPR002048 GO:0005509
Mibi12g2074 551 SMART efh_1 438 466 IPR002048 GO:0005509
Mibi12g2074 551 SMART efh_1 401 429 IPR002048 GO:0005509
Mibi12g2074 551 SUPERFAMILY Protein kinase-like (PK-like) 92 367 IPR011009 -
Mibi12g2074 551 Gene3D - 376 534 - -
Mibi12g2074 551 MobiDBLite consensus disorder prediction 49 84 - -
Mibi12g2074 551 ProSiteProfiles EF-hand calcium-binding domain profile. 434 469 IPR002048 GO:0005509
Mibi12g2074 551 ProSitePatterns EF-hand calcium-binding domain. 519 531 IPR018247 -
Mibi12g2074 551 MobiDBLite consensus disorder prediction 1 84 - -
Mibi12g2074 551 FunFam CDPK-related kinase 1 87 179 - -
Mibi12g2074 551 Pfam Protein kinase domain 94 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2074 551 SMART serkin_6 94 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2074 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Mibi12g2074 551 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Mibi12g2074 551 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Mibi12g2074 551 Gene3D Phosphorylase Kinase; domain 1 87 179 - -
Mibi12g2074 551 FunFam Calcium-dependent protein kinase 28 395 464 - -
Mibi12g2074 551 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2074 Mibi-ChrMibi12 37247835 37252104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2074 1 550 EF-hand Containing Proteins AT2G17890 74.606 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi12g2074 Pkinase 3.6e-69 CL0016