Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2053 ATGGAACCCAATAATTATATGAACTGCAGTAGCAGTAGGAGTTTGGTACTTTGGTGTATGATGGAAGCCATGGAGTCATGTGTCCCACCTGGCTTTCGCTTCCACCCAACAGATGAAGAGCTCGTTGGTTATTATCTCCGCAAGAAAGTCGCTTCTCAGAAGATAGATCTTGACGTTATCAGAGAGATCGACCTATATCGCATTGAACCATGGGATCTCCAAGAGAGGTGCAGGATCGGGTATGAGGAGCAGAACGAGTGGTATTTCTTCAGCCACAAGGATAAGAAGTATCCGACGGGGACGAGGACAAACAGAGCCACCGTGGCCGGGTTTTGGAAGGCGACAGGAAGAGACAAGGCAGTGTATGACAAGACAAAGCTCATAGGAATGAGGAAGACACTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACTGACTGGATCATGCATGAATATAGGCTTGAATCTGATGAAAATGCACCCCCTCAGGAAGAAGGATGGGTGGTATGCAGAGCATTCAAGAAAAAAAGCACTGGCCAAACAAAGACAATAGAAGGATGGGATTCAGGTTACTTCTACAACGAGGAGACAATAAGTGGTGTGGACTACGTATCAACAAGGCAGTCTCATCAGAGTTTCTTAGGTCAAAGTTTCTTGTGTAAGAAGGAGATAGAGGCAGATAATAGCTTGAGCTTCATTCACAACACATCAGATCAGTTCGTAGAGCTTCTTCCTCAGCTAGAAAGTCCATCTCTGCCATCAATAAAGAGGCCAAGCTCATCACTAGTGTCTTTAATATCCCACGATAATAACATCAACCATAACAAGAACCACGTAGAAGAAGACCAAAACAACAAAAAGGTGACAGATTGGAGGGCTCTTGACAAATTTGTGGCATCTCAATTGAGTCAAGATGATCAAGAGAGGCATGGAAGTAGTGATAATCATGGATTAGTGTCAGGCTTTGAAACGCACGAGGCATTGCTGTTATTGCAGAGTGGCAACGATGAAGGCAACAAGTTCATGAGCCCATTTTTAAATGGAAGCTCTGACTGTGACATTGGGATATGCGTGTTTGATAAATGA 1092 0.4396 MEPNNYMNCSSSRSLVLWCMMEAMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKKKSTGQTKTIEGWDSGYFYNEETISGVDYVSTRQSHQSFLGQSFLCKKEIEADNSLSFIHNTSDQFVELLPQLESPSLPSIKRPSSSLVSLISHDNNINHNKNHVEEDQNNKKVTDWRALDKFVASQLSQDDQERHGSSDNHGLVSGFETHEALLLLQSGNDEGNKFMSPFLNGSSDCDIGICVFDK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2053 363 ProSiteProfiles NAC domain profile. 28 177 IPR003441 GO:0003677|GO:0006355
Mibi12g2053 363 SUPERFAMILY NAC domain 18 177 IPR036093 GO:0003677|GO:0006355
Mibi12g2053 363 FunFam NAC domain-containing protein 37 181 - -
Mibi12g2053 363 Gene3D NAC domain 37 181 IPR036093 GO:0003677|GO:0006355
Mibi12g2053 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 279 - -
Mibi12g2053 363 Pfam No apical meristem (NAM) protein 29 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2053 Mibi-ChrMibi12 36965121 36968767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2053 21 362 NAC Transcription Factor Family AT2G18060 63.441 4.20e-158 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi12g2053 NAM 2.8e-38 No_clan