Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2052 ATGGTCATGCCTCCTCCTCTTCTCTTCCTTCTACTCCTCTGCGCACCGTTTCTAACGTGCGCCGAGCGAAACAGCGTCGCCATTGCTGAGATCGGAGCCCTGACATCCTTCAAGCTCAACCTTCAAGATCCTCTCGGCGCTCTCAACGGCTGGGATCCTTCCACGCCGGCCGCCCCTTGCGACTGGCGTGGAGTTTCCTGTAACAATAACAGAGTCACTGAGTTGCGCTTGCCTCGCCTTCAACTCGGTGGCCGACTCACTGACCGGATTTCCGACCTCCGTATGTTGCGGAAGCTTAGTCTTCGCTCTAACTCCTTCAACGGCACTATTCCTTCTTCGATCGGAAAATGTGTCTTCCTACGCGCCGTGTTTTTGCAGTACAACTCACTCTCCGGTACTCTTCCGCCGGAGATCGGAAACCTCACCGGCCTTCAGATTCTTAATGTTGCTCAGAATCGTCTCTCCGGCAGAATCTCCGGCGATATTCCGGTTAGCCTGAAGTACGTTGATCTCTCGTCGAATTCCTTTTCTGGTGAGATTCCGAGTGGTATTGCGAATCTTTCTCAGCTTCAGTTAATTAACCTGTCGTACAACCAGTTCTCCGGTGAGATTCCGGCGGGTTTTGGACAGCTTCAGCAGTTGGAATATCTCTGGCTTGATCATAATCTACTCGGAGGAACTCTGCCTTCGGCACTGGCTAACTGCTCTTCACTTGTGCATCTGAGTGTAGAAGGAAATGTACTTGGTGGAGTGATTCCGGCGGCTATTGTTTCTCTTCCGAGGCTTCAGGTGATGTCTCTCTCTCAGAATAATCTTACCGGTTCGATTCCCGCTTCCATTTTCTGCAATGTTTCGGTCTACGCGCCGTCACTTCGAATTGTTCAGTTAGGATTTAATGGTTTCACGGATATTGTCAGGCCTCTGGGATTATCAACGTGTTTTAGTGTTCTTCAGGTTCTGGATATTCAGCACAATAGGATACACGGCACGTTTCCCTTGTGGATAACGAATATGCCCACGTTAACAATGCTTGATGTTTCCGGTAACGCATTTTCTGGTGAGATTCCGTCCGAAATTGGGAACCTCTCGAGATTGGAGGAGTTGAGGATGGCCAACAATTCATTTACTGGGAAGATTCCTCAGGAAATCAAGAAATGTGCTTCCCTGCGCGTTATCGATTTGGAAGGCAATCGGTTTACCGGAGAGGTTCCTTCGTTTTTTGGTTATATGTCAGGTCTGAAGGTGCTGTCCCTCGAGGGGAATCTTTTCTCTGGTTCTGTTCCGGGGAGTTTTGGTAACCTTTCTGCGCTGGAAACCCTGAGTTTGAGAGGTAACCACTTGAGTGGAACCATGCCAGAGGAGGTCATGGGATTGAGCAATATTTCAAGTCTTGATCTCAGTGGAAATAAGTTTACGGGTCCATTGTCTTCAAGTATTGGAAACATGGGTCGATTGATGGTTCTCAATCTGAGTGGCAACAGCTTTTCTGGAAAAATCCCTGCTAGTTTGGGGAATCTTTTCAGGCTAACTACGCTTGACTTGAGCAAGCAAAATCTTACTGGAGAGTTACCATTCGAGCTTTCAGGTTTGCCGAATCTGCAAGTCATTGCTTTGCAGGAGAACAGATTATCTGGGGACGTTCCTGAAGGGTTTAGCAGTTTGATGAGTCTGCGATATGTGAACCTGAGCTCTAATGCGTTTTCGGGACACATTCCTCAGAACTATGGCTTTCTTCGATCACTAGTTGCTCTTTCTCTGTCTCACAACCACATTGCAGGAACTATTCCTCCAGAGATCGGGAACTGCTCTGATATTGAGATTCTTGAGCTTGGCTCAAATTCTTTGACAGGTCATATTCCGACTGATATCACTCGGCTCACCCAATTGAGAGAGCTTGATTTGAGTAGAAACAATTTAACCGGAGAAATACCCGGCGATATCTCCAAATGCTCGTCCTTAAATGCTCTGCTGGTGGATCACAACCATCTTTCAGGCACTATACCGGGGTCACTATCTGAGCTATCAAACCTGACAATGCTGGATCTCTCTGCTAACAACTTGAGCGGGGAAATATCTAGCAACATTTCCATGATGCCTAATTTAGTGTCCGTCAATGTCTCAGGAAATAACCTGGAAGGTGAGATCCCCCCAGCCTTGGGTGCTCGGTTCAACAATTCCTATGCATTTGCAGATAATCAAAACTTATGTGGGAAGCCACTAGATAGAAAGTGTGAAAATGTAATCAACAGGGACAAGAAGAAGAGGTTGATTGTGTTGGTTGTTGTAGTTGTTGCCGGAGCTTGCTTACTATTACTGTGTTGCTGCTTCTACATATACAGCCTTCTGCGGTGGCGTAAAAGGCTCAAGGAACGGGCATCTGGGGAGAAAAAAAGGAGTCCTGCTAGGGCTAGTTCTGGAGCAAGTGGGGGTCGAAGCAGCTCTGATAATGGCGGACCAAAACTGGTCATGTTTAATACCAAAATCACACTAGCTGAAACCATTGAAGCAACTAGGCAGTTTGACGAAGAGAATGTGCTGAGCAGAACAAGGTACGGTTTGGTATTCAAGGCCTGCTACAATGACGGAATGGTGCTGTCAATTCGCAGGCTCCAAGATGGATCACTGGACGAAAATATGTTCAGGAAAGAAGCAGAGTCACTGGGGAAAGTGAAGCACCGAAATTTAACCGTTCTTAGAGGTTACTACGCAGGACCACCTGACATGAGACTTTTAGTGTATGATTACATGCCCAATGGAAACCTCGCAACCCTCCTCCAAGAAGCATCTCATCAAGACGGTCATGTTCTGAATTGGCCAATGCGCCATCTCATTGCACTTGGGATTGCTCGTGGCTTAGCTTTCCTCCACCAATCCTCAATGGTTCATGGGGACGTGAAACCACAAAGTGTCCTGTTTGATGCTGATTTTGAGGCTCACTTGTCAGATTTTGGGCTCGACCGTCTCACAGTAGCCACACCCGGCGACCCATCCACTTCAACCTCAATGGGCACACTGGGTTACGTATCACCTGAAGCTATATTAACAGGGGAAGCCACGAAAGAGTCTGATGTGTACAGCTTTGGGATAGTGTTGCTGGAGCTTCTTACAGGGAAGCGACCGGTGATGTTCACACAGGATGAGGATATAGTGAAATGGGTGAAGAAACAACTCCAAAGGGGTCAAATCACAGAGCTTTTGGAGCCAGGGTTGCTTGAACTCGACCCAGAATCATCCGAATGGGAAGAGTTCTTGCTGGGTGTGAAAGTAGGCTTGCTTTGCACAGCACCAGACCCTCTCGATCGACCAACCATGTCTGATATTGTGTTCATGCTTGAAGGTTGCCGCGTCGGACCGGACATCCCTTCCTCCGCCGACCCCACCTCCCAACCTTCGCCGGCGTGA 3402 0.4803 MVMPPPLLFLLLLCAPFLTCAERNSVAIAEIGALTSFKLNLQDPLGALNGWDPSTPAAPCDWRGVSCNNNRVTELRLPRLQLGGRLTDRISDLRMLRKLSLRSNSFNGTIPSSIGKCVFLRAVFLQYNSLSGTLPPEIGNLTGLQILNVAQNRLSGRISGDIPVSLKYVDLSSNSFSGEIPSGIANLSQLQLINLSYNQFSGEIPAGFGQLQQLEYLWLDHNLLGGTLPSALANCSSLVHLSVEGNVLGGVIPAAIVSLPRLQVMSLSQNNLTGSIPASIFCNVSVYAPSLRIVQLGFNGFTDIVRPLGLSTCFSVLQVLDIQHNRIHGTFPLWITNMPTLTMLDVSGNAFSGEIPSEIGNLSRLEELRMANNSFTGKIPQEIKKCASLRVIDLEGNRFTGEVPSFFGYMSGLKVLSLEGNLFSGSVPGSFGNLSALETLSLRGNHLSGTMPEEVMGLSNISSLDLSGNKFTGPLSSSIGNMGRLMVLNLSGNSFSGKIPASLGNLFRLTTLDLSKQNLTGELPFELSGLPNLQVIALQENRLSGDVPEGFSSLMSLRYVNLSSNAFSGHIPQNYGFLRSLVALSLSHNHIAGTIPPEIGNCSDIEILELGSNSLTGHIPTDITRLTQLRELDLSRNNLTGEIPGDISKCSSLNALLVDHNHLSGTIPGSLSELSNLTMLDLSANNLSGEISSNISMMPNLVSVNVSGNNLEGEIPPALGARFNNSYAFADNQNLCGKPLDRKCENVINRDKKKRLIVLVVVVVAGACLLLLCCCFYIYSLLRWRKRLKERASGEKKRSPARASSGASGGRSSSDNGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPQSVLFDADFEAHLSDFGLDRLTVATPGDPSTSTSMGTLGYVSPEAILTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2052 1133 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 623 744 - -
Mibi12g2052 1133 FunFam Putative LRR receptor-like serine/threonine-protein kinase 803 915 - -
Mibi12g2052 1133 Gene3D Ribonuclease Inhibitor 355 456 IPR032675 -
Mibi12g2052 1133 Gene3D Ribonuclease Inhibitor 29 164 IPR032675 -
Mibi12g2052 1133 Gene3D Ribonuclease Inhibitor 250 354 IPR032675 -
Mibi12g2052 1133 Pfam Leucine Rich Repeat 485 506 IPR001611 GO:0005515
Mibi12g2052 1133 ProSiteProfiles Leucine-rich repeat profile. 628 650 IPR001611 GO:0005515
Mibi12g2052 1133 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Mibi12g2052 1133 SMART LRR_sd22_2 259 286 - -
Mibi12g2052 1133 SMART LRR_sd22_2 626 655 - -
Mibi12g2052 1133 SMART LRR_sd22_2 434 460 - -
Mibi12g2052 1133 SMART LRR_sd22_2 674 697 - -
Mibi12g2052 1133 SMART LRR_sd22_2 211 237 - -
Mibi12g2052 1133 SUPERFAMILY Protein kinase-like (PK-like) 818 1121 IPR011009 -
Mibi12g2052 1133 SUPERFAMILY L domain-like 33 351 - -
Mibi12g2052 1133 ProSiteProfiles Protein kinase domain profile. 840 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2052 1133 FunFam Nuclear pore complex protein NUP107 27 162 - -
Mibi12g2052 1133 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Mibi12g2052 1133 Pfam Leucine rich repeat 388 447 IPR001611 GO:0005515
Mibi12g2052 1133 Pfam Leucine rich repeat 317 374 IPR001611 GO:0005515
Mibi12g2052 1133 Pfam Leucine rich repeat 579 639 IPR001611 GO:0005515
Mibi12g2052 1133 Pfam Leucine rich repeat 508 566 IPR001611 GO:0005515
Mibi12g2052 1133 Gene3D Ribonuclease Inhibitor 165 249 IPR032675 -
Mibi12g2052 1133 MobiDBLite consensus disorder prediction 793 820 - -
Mibi12g2052 1133 Gene3D Ribonuclease Inhibitor 457 747 IPR032675 -
Mibi12g2052 1133 Gene3D Transferase(Phosphotransferase) domain 1 916 1119 - -
Mibi12g2052 1133 Gene3D Phosphorylase Kinase; domain 1 812 915 - -
Mibi12g2052 1133 FunFam Inactive leucine-rich repeat receptor-like protein kinase 163 254 - -
Mibi12g2052 1133 FunFam Uncharacterized protein 478 556 - -
Mibi12g2052 1133 FunFam Uncharacterized protein 259 476 - -
Mibi12g2052 1133 SUPERFAMILY L domain-like 480 740 - -
Mibi12g2052 1133 PANTHER LEUCINE RICH REPEAT KINASE 2 555 1113 - -
Mibi12g2052 1133 SMART LRR_typ_2 187 210 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 211 235 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 698 722 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 410 433 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 434 458 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 674 697 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 530 553 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 259 283 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 482 506 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 626 650 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 338 362 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 93 117 IPR003591 -
Mibi12g2052 1133 SMART LRR_typ_2 578 602 IPR003591 -
Mibi12g2052 1133 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 916 1119 - -
Mibi12g2052 1133 Pfam Protein kinase domain 850 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g2052 1133 FunFam LRR receptor-like serine/threonine-protein kinase 557 622 - -
Mibi12g2052 1133 SUPERFAMILY L domain-like 289 568 - -
Mibi12g2052 1133 MobiDBLite consensus disorder prediction 805 820 - -
Mibi12g2052 1133 PRINTS Leucine-rich repeat signature 674 687 - -
Mibi12g2052 1133 PRINTS Leucine-rich repeat signature 629 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2052 Mibi-ChrMibi12 36925122 36928523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2052 1 1133 Receptor kinase-like Gene Family AT4G36180 69.843 0.0 1536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Mibi12g2052 Pkinase 4.4e-33 CL0016