Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2019 ATGTCAAACACGAAGCCGGAGCAATGGCAGTGGGAAAACGCCACTGCAGGCGCAGTTGCAGGATTTGCCACCGTCGTTATCATGCATCCCCTTGACGTTGTCCGAACTCGCTTCCAAGTTAATGATGGCCGAGTTCACTTTGTTCCGAGTTATAAGAACACTGCTCACGCCATTTTCACCATTGCTCGCTCAGAGGGATTAAGAGGACTGTATGCTGGCTTGCTTCCTGCAGTCCTTGGGTCAACTATTTCATGGGGTCTATACTTCTATTTCTATGATAAAGCCAAGCAAAGGTATGCTAGGAACAGGGAGGAGAAGCTGAGCCCTGGTTATCATCTTGCTTCAGCTGCTGAAGCAGGGGCTTTGGTCTCCTTATGCACAAATCCTGTTTGGCTGGTAAAAACAAGAATGCAGCTTCAGAATCCTCTGCATCAAGCGCAGCCGTATAATGGGATTTATGATGCATTTAAAACCATTATTAAAGAAGAAGGATTGAAGGCACTGTACAGAGGACTTGGTCCTAGTCTTTTTCTGGTTTCTCATGGTGCTATCCAGTTCACAGTATATGAAGAGCTTCGGAAAGTGATTGTAGATTTGAAGAGTAAGGAAAGTGAGATGCATCATCGAAATCCTGATAAGCTGTTGAATTCTATGGATTATGCTGTTTTTGGAGCAGCTTCAAAAGTTGCTGCCACTCTCATAAGCTATCCATTTCAGGTCCTACGGGCTCGATTGCAGCAACGGCCTAATGTTGATGGGCTTCCAAGATATATGGATAGTTGGCATGTCGTGAAGGAAACTGCACGGTTTGAAGGTGTTCGAGGTTTTTACAAAGGGATCACCCCAAACCTATTGAAAAATGTTCCTGCTTCATCAATAACATTTATTGTCTATGAAAATGTGCTTAAATTGCTTAAACTAGCTAGAAGGAATGACTAG 939 0.4388 MSNTKPEQWQWENATAGAVAGFATVVIMHPLDVVRTRFQVNDGRVHFVPSYKNTAHAIFTIARSEGLRGLYAGLLPAVLGSTISWGLYFYFYDKAKQRYARNREEKLSPGYHLASAAEAGALVSLCTNPVWLVKTRMQLQNPLHQAQPYNGIYDAFKTIIKEEGLKALYRGLGPSLFLVSHGAIQFTVYEELRKVIVDLKSKESEMHHRNPDKLLNSMDYAVFGAASKVAATLISYPFQVLRARLQQRPNVDGLPRYMDSWHVVKETARFEGVRGFYKGITPNLLKNVPASSITFIVYENVLKLLKLARRND 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2019 312 Gene3D Mitochondrial carrier domain 50 311 IPR023395 -
Mibi12g2019 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 308 IPR044712 GO:0006862|GO:0055085
Mibi12g2019 312 FunFam Folate transporter 1, chloroplastic 104 310 - -
Mibi12g2019 312 FunFam folate transporter 1, chloroplastic isoform X1 1 103 - -
Mibi12g2019 312 PRINTS Mitochondrial carrier protein signature 23 41 IPR002067 GO:0055085
Mibi12g2019 312 PRINTS Mitochondrial carrier protein signature 116 138 IPR002067 GO:0055085
Mibi12g2019 312 PRINTS Mitochondrial carrier protein signature 71 89 IPR002067 GO:0055085
Mibi12g2019 312 Pfam Mitochondrial carrier protein 107 197 IPR018108 -
Mibi12g2019 312 Pfam Mitochondrial carrier protein 218 306 IPR018108 -
Mibi12g2019 312 Pfam Mitochondrial carrier protein 9 102 IPR018108 -
Mibi12g2019 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 304 IPR018108 -
Mibi12g2019 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 195 IPR018108 -
Mibi12g2019 312 SUPERFAMILY Mitochondrial carrier 10 300 IPR023395 -
Mibi12g2019 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2019 Mibi-ChrMibi12 36460926 36466420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2019 30 305 Chloroplast and Mitochondria Gene Families AT2G47490 36.396 6.31e-49 164