Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2000 ATGGAGAATTCGCCGCCTAATGGAAAGTTTCATCTGACTCCGAATTCCAGGTTCTCAGCTAAGGAGGGAAGAAGTGGGTATGAACCATCGGACACAGAAACAGAGTGGCAAGAAGTTCCCCGACATGAACGAGAAAGAAAGAATCTAACTTTAGGACCTGAAGAAGCAAAAGTCCTCAACTTGAGGACTAAAAGTCCCATGTCACTACACAGAAAGCATCCTCCCAAGTTTGAACTCGAAATCTCATCTTCTACATCCTCACTAGCAAGCTCAGCAAGAAGAAGACCCGAAAGTAGATCGCCATACAGGCCCTTCAGAGCTGAAGGTGAGGCTCCATATAACATAACTGGTTTGGATGTTCAGAGAAGTGTAAGTCCTCTGCCAAAACCTCCAAATCACCCTGAAAGAGAAAATCTCAATTGGAGAACAGTTAATAGAGTGAATGAGAAACCAAACCAGAGGAGAGCAATGACTGCTCCCAGGCAAAGGGGAAGAGAAAGGGAAGCATACCATGGAATCAATCCTTCAATAGGAGAGATCAACGAGATGGTTGCTGAGTCAAATTTTTCAAGAGATCATGTTAATGACGAGTTCATGGTAACAAGTACAGAGTCGAGTTTAGCTGGTGATATTTTCTTTTCTCGTGAATACAATACCATGATGAAGCAGAAGAATTTTTCAACAAAACCGCCAAACATTGATCTTGAAACCCAGTTTAATAGCTCGAGGCCTAAAGTCCTTCCGCAAAAAGCCACCCCTTTTCACACTCATCATCATCAAAACAGGGCAAATGGTAATCTTAGTAATGTGAACATACGAGGTACATCATCTAGTACTACTGTTATGTCTCGATCAAGTACGGTTTCTAGTAATGCTGCTAAAAGCAAAAAGAATAGTGGGAGTTTAAGCTCTAGTGGTAGTGTGAAGGGTGATGTTAGTTGGACAAGTGCGAGCATTCAGAGATTTATAATGAACAGGAAAAAGAACCAATCAGAGACATGGTTTGCTTGCATGAGAAGAGTAGGCAGGGCATCGAATAAGTCTCCTGAACATCGATCAGTTGATGAGGCTTCTATCATTGAGAAGGCTTTCGTGTTACAAAGCCTACCACAATTCTGGGCAGATAAGCATCAACCCACCTCACTGGATGGCTTCATTTGTCACCAGCAAGAAGCTCAGCTTCTCAAGGAATTGGCATCTCAAGATGTGTGCCCTCATATTTTGCTAAAAGGACCAATCGGTTCAGGTAAAAGAGCGCTAGCAATGGCTTTTCTCCAAGAAATATTCGGTGATGCAATGTCCAATCTATCTCATGATTTAAGAAATTTCTCCATCCAGGAAAGGAGGCCCGTGAAAATCACTGTTCCAATAACGTCCAGTTCTCATCACATGGAGCTCAATGTAAACTTAGAACCAAATGCTAAATATGCTTTAATGGGATTGGTTAAGGAAATAAGCACTGAATGTGCGACTACCCCTAAAGTCAGTAAATTCAATTTCAAATCAGATTACAAAGTATTAGTTCTTTACGAGGTTGACAAAGCAGCTGATAACATCCAACACATGATCAAATGGATTGTAGATCGCTATTCTGATGTATGCAAACTCATAGTTTGTTGTGAAGATGATGAAAATATCCTTGAACCTGTGAAAAACCGGTTCAAAATTATTGATATCAATGCTCCAGTCTCTCATGAAATAATGGATGTTCTTATTCAGATAGCAAAACAAGAAGAAATTGATCTATCCATGAACTTTGCAGCTAAGATTGCCACAAAGTCAAAGCAGAATGTCAGGAAAGCAATCATGGCTCTTGAAGCATGCAGAGCACACAACTATCCATTTTCAGAAGAACAACCGATTCCACTTGGATGGGAGGAGAGTATAATGGAAATTTCTGCAGAGATCCTAGCTGATCCTTCACATTCACGCTTATTCTCAATCAGAGGGAAATTACAGAAGCTTCTGGTGGATTTTGTTCACCCCAAGCTGATTCTCCGGAAACTGGTGGAACAACTCCTAAAAGGAATTGAGAGCAACTTAAAAAGGGAGCTCTTTTACTGGCATGCTTATTATAATAAGAGACTCCCACCAGGAACTACAGCTTTGCTAAAATTAGAAGAATTTGTGGCAAAGTTCATGAGCATATACAGAAAAAGCACTAGCGGGCGACAGTTTGTGTAG 2184 0.4093 MENSPPNGKFHLTPNSRFSAKEGRSGYEPSDTETEWQEVPRHERERKNLTLGPEEAKVLNLRTKSPMSLHRKHPPKFELEISSSTSSLASSARRRPESRSPYRPFRAEGEAPYNITGLDVQRSVSPLPKPPNHPERENLNWRTVNRVNEKPNQRRAMTAPRQRGREREAYHGINPSIGEINEMVAESNFSRDHVNDEFMVTSTESSLAGDIFFSREYNTMMKQKNFSTKPPNIDLETQFNSSRPKVLPQKATPFHTHHHQNRANGNLSNVNIRGTSSSTTVMSRSSTVSSNAAKSKKNSGSLSSSGSVKGDVSWTSASIQRFIMNRKKNQSETWFACMRRVGRASNKSPEHRSVDEASIIEKAFVLQSLPQFWADKHQPTSLDGFICHQQEAQLLKELASQDVCPHILLKGPIGSGKRALAMAFLQEIFGDAMSNLSHDLRNFSIQERRPVKITVPITSSSHHMELNVNLEPNAKYALMGLVKEISTECATTPKVSKFNFKSDYKVLVLYEVDKAADNIQHMIKWIVDRYSDVCKLIVCCEDDENILEPVKNRFKIIDINAPVSHEIMDVLIQIAKQEEIDLSMNFAAKIATKSKQNVRKAIMALEACRAHNYPFSEEQPIPLGWEESIMEISAEILADPSHSRLFSIRGKLQKLLVDFVHPKLILRKLVEQLLKGIESNLKRELFYWHAYYNKRLPPGTTALLKLEEFVAKFMSIYRKSTSGRQFV 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2000 727 MobiDBLite consensus disorder prediction 256 311 - -
Mibi12g2000 727 Gene3D - 564 621 - -
Mibi12g2000 727 Gene3D - 371 562 IPR027417 -
Mibi12g2000 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 610 IPR027417 -
Mibi12g2000 727 MobiDBLite consensus disorder prediction 24 52 - -
Mibi12g2000 727 MobiDBLite consensus disorder prediction 79 94 - -
Mibi12g2000 727 SUPERFAMILY post-AAA+ oligomerization domain-like 623 717 IPR008921 GO:0003677|GO:0006260
Mibi12g2000 727 MobiDBLite consensus disorder prediction 1 20 - -
Mibi12g2000 727 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 369 706 - -
Mibi12g2000 727 MobiDBLite consensus disorder prediction 1 110 - -
Mibi12g2000 727 FunFam replication factor C subunit 3 564 621 - -
Mibi12g2000 727 FunFam Replication factor C subunit 3 371 562 - -
Mibi12g2000 727 MobiDBLite consensus disorder prediction 258 311 - -
Mibi12g2000 727 Gene3D - 624 717 - -
Mibi12g2000 727 CDD AAA 389 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2000 Mibi-ChrMibi12 36234379 36237925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2000 372 718 Core DNA Replication Machinery Family AT5G27740 40.688 1.73e-85 272