Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1984 ATGGAACTGAGAGGCTTAGATAAGGAAATAGAGATGCCATTACCAACCACTTCAGGTAATTATAATCCTTCCAATAGAGACTCATCTTCTTCTCCAACTCTAGCTGCTTCAACCAGTAGTGATCAACCACCTCCTCAACCTTCGGACCACTGCTATCACCATCTTCATCATCCTCCTCCTCCTTCTCTGCCATCAAACCCACTTCAGCAATTGCAGAGAAACACAAGAAATCCAGATCCAGCAAGCATAACGGCGATCACACCAATTTCTACCAGATCAAACCCAAGAACAACAATTAGATACAGAGAATGCTTGAAGAATCATGCGGCGAGTATGGGGGGACACGTGGTGGATGGATGTGGCGAGTTCATGCCAGGTGGAGAAGAAGGAACCCCACAATCCTTAAGATGTGCTGCTTGTGATTGCCACAGGAATTTTCACCGGAAAGAGACCGATGGCGAATCTCAAACCAGTGTTCTAAATTACTATGCCTACCCTCCCAGCAAAAGCAATAACTCACAAAGTATGATACTTTCTCCTCATTTTCCACCACCCCCACCTTCTCTGCATCATCATCATCAACATCACACAAGATTTTCAGGAGGGTCGTTTCCACCGTTTATGATGGCCTTTGGCGGCGGTGGGGTGGCGGCGGAGTCATCAAGTGAAGATCTGAACATGTTTCAGTGTAATGAAGTGGGAGGCCAAGGTTCAGTGCAGGTGGGGGCTTCATCTAAGAAGAGGTTTAGGACAAAGTTTAGCCAGGAGCAGAAGGAAAGGATGATGGAGTTTGCAGAGAAATTGGGATGGAGGATCCAGAAACATGATGAGCAAGAAGTGAATCAGTTTTGTAATCAAGTGGGTGTGAAAAGGCAGGTTTTCAAGGTTTGGATGCATAACAACAAGCAGGCTATGAAGAAGAAGCAAATGTAA 933 0.4566 MELRGLDKEIEMPLPTTSGNYNPSNRDSSSSPTLAASTSSDQPPPQPSDHCYHHLHHPPPPSLPSNPLQQLQRNTRNPDPASITAITPISTRSNPRTTIRYRECLKNHAASMGGHVVDGCGEFMPGGEEGTPQSLRCAACDCHRNFHRKETDGESQTSVLNYYAYPPSKSNNSQSMILSPHFPPPPPSLHHHHQHHTRFSGGSFPPFMMAFGGGGVAAESSSEDLNMFQCNEVGGQGSVQVGASSKKRFRTKFSQEQKERMMEFAEKLGWRIQKHDEQEVNQFCNQVGVKRQVFKVWMHNNKQAMKKKQM 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1984 310 FunFam Zinc-finger homeodomain protein 2 234 307 - -
Mibi12g1984 310 ProSiteProfiles 'Homeobox' domain profile. 244 308 IPR001356 GO:0003677
Mibi12g1984 310 SUPERFAMILY Homeodomain-like 236 307 IPR009057 -
Mibi12g1984 310 MobiDBLite consensus disorder prediction 1 94 - -
Mibi12g1984 310 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 101 150 IPR006456 -
Mibi12g1984 310 MobiDBLite consensus disorder prediction 67 94 - -
Mibi12g1984 310 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 100 150 IPR006456 -
Mibi12g1984 310 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 246 303 IPR006455 -
Mibi12g1984 310 MobiDBLite consensus disorder prediction 15 46 - -
Mibi12g1984 310 Gene3D - 231 307 - -
Mibi12g1984 310 Pfam ZF-HD protein dimerisation region 99 151 IPR006456 -
Mibi12g1984 310 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 74 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1984 Mibi-ChrMibi12 36113163 36114095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1984 56 310 ZF-HD Transcription Factor Family AT2G18350 49.446 1.28e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi12g1984 ZF-HD_dimer 6.7e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1984 12 36113163 36114095 Mibi12g1984 12 36113163 36114095 ECH