Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1939 ATGGGGACAGGGGAAGAGAGCACTCCTAAACAGTCCAAACAAGCCTCTACAACTCAGGAAATACCTACAACACCTTCATACCCTGATTGGTCCAGATCTATGCAGGCTTATTATGCTCCTGGAGCCACCCCACCTCCTTTTTTTGCCTCAACTGTTGCTCCACCAACTCCTCACCCCTATATGTGGGGGAGCCAGCATCCTCTGATTCCTCCATATGGGACGCCGGTTCCATATCCTCCCATGTATCCTCCAGGTGGTGTTTATGCTCATCCTGGTATGGTCACGACTCCAAGCTCCGCACAGCAAACCGTGGAACCTGAAGGGAAGGGACCTGATGGAAAAGATCGGAATTCTGCCAAAAAATTGAAGGGAACTTCTGGTAACACAGGTTCCAAAGCTGGAGAAAGTGGAAAGGTAGGCTCAGGATCTGGGAACGAAGGCGTTTCGCAAAGTGCTGATAGTGGTTCTGAGGGTTCATCAGATGCAAGCGATGAGGATACTAACCAACAGGATTCAACTAGTAACAAGAAGGGAAGCTTTGACCAGATGCTTGTTGATGGAGCCAATGCACAGAACAGTTCTGGAGGTGCCATTTCTCAGAAGCCAGCAACTAATCTTAATATCGGAATAGACTTGTGGAATGCATCTGCTGCTGGTTCGGATGTTGCAAAAATGAGACACAATCAATCTGGTGTTTCAGCAGGTGTTGCTCCTTCGACCATTATGGGAAGGGAAGTTGCCCTTGGTGACCAGTGGATACAAGATGAACGTGAACTGAAAAGACAGAAGAGGAAGCAGTCTAATAGAGAGTCAGCTAGGAGGTCCAGACTGCGGAAGCAGGCTGAATGTGAAGAGTTACAGAAAAGGGTGGAGGCGCTTGGAAGTGAGAATAGAACTCTGAGAGATGAGCTCCAGAGGCTTTCTGAAGAATGTGAGAATCTTACTTCCGAAAATACTTCTATCAAGGAAGAGTTGGAACGACTGTGTGGGCCTGATGCAGTGGCATAA 1008 0.4802 MGTGEESTPKQSKQASTTQEIPTTPSYPDWSRSMQAYYAPGATPPPFFASTVAPPTPHPYMWGSQHPLIPPYGTPVPYPPMYPPGGVYAHPGMVTTPSSAQQTVEPEGKGPDGKDRNSAKKLKGTSGNTGSKAGESGKVGSGSGNEGVSQSADSGSEGSSDASDEDTNQQDSTSNKKGSFDQMLVDGANAQNSSGGAISQKPATNLNIGIDLWNASAAGSDVAKMRHNQSGVSAGVAPSTIMGREVALGDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGSENRTLRDELQRLSEECENLTSENTSIKEELERLCGPDAVA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1939 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Mibi12g1939 335 FunFam BZIP transcription factor 258 309 - -
Mibi12g1939 335 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Mibi12g1939 335 SMART brlzneu 256 320 IPR004827 GO:0003700|GO:0006355
Mibi12g1939 335 Gene3D - 259 313 - -
Mibi12g1939 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 321 IPR004827 GO:0003700|GO:0006355
Mibi12g1939 335 MobiDBLite consensus disorder prediction 122 202 - -
Mibi12g1939 335 SUPERFAMILY Leucine zipper domain 259 315 IPR046347 GO:0003700|GO:0006355
Mibi12g1939 335 Pfam bZIP transcription factor 256 318 IPR004827 GO:0003700|GO:0006355
Mibi12g1939 335 MobiDBLite consensus disorder prediction 82 202 - -
Mibi12g1939 335 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 330 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mibi12g1939 335 Coils Coil 269 324 - -
Mibi12g1939 335 MobiDBLite consensus disorder prediction 1 43 - -
Mibi12g1939 335 MobiDBLite consensus disorder prediction 259 281 - -
Mibi12g1939 335 CDD bZIP_plant_GBF1 261 311 IPR045314 GO:0003700|GO:0006355
Mibi12g1939 335 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1939 Mibi-ChrMibi12 35695971 35698520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1939 1 335 bZIP Transcription Factor Family AT4G36730 51.895 5.58e-104 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi12g1939 MFMR 2.4e-30 No_clan