Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1920 ATGCGTCTCTTTCTCCTCATCCCAATCTTCTCTTCCGCTCTGTTCTTCTGTTTCCCTCTGGTTCTCGGGCAGCAACCTTATATTGGTTTGTACACTACTCACTGTTACAAAGGGGCAAAATCAAATTCTATTCGTGGATACACTTGCAACGGGGTTGCTCATAGCTGCCAAGCTTACCTCACCTTCAGGTCTCAACCTCTTTACTACTCTGTTCACACCATTTCTGCTCTGCTTGGCTCTGACCCATCTCAACTTTCTGAAATCAACTCTGTCTCTCTGAATGCCACCTTTCCCCAAAATCAAATGGTGATTGTTCCCGTCAACTGCTCATGTTCAAGTGATTATTATCAGACTAACACTTCCTACACCGTCCATAACACAGAAACCTATTTCTTGATAGCTAACGACACTTTCCAAGGCCTCTCCACCTGTCGAGCTCTCATTAATCAAAACGACATTCCTGGAGATTTATTTCCAGGCACGAAACTCACAGTCCCTCTTAGATGTGCTTGTCCCACAAAAAATCAAACTGACAAAGGCGTCAAGTACTTGCTGAGTTACTTGGTCACCTGGGGTAATTCTGTTTCCGTCATCAGTGAAAGATTTGGTGTACCCAATGATCTCACCCTTGAATCAAATAGCCTTTCTGAACAAGGTGTGATTTATCCCTTTACCACACTTTTAGTGCCTCTTCAACATAAACCCAACATCTCTAAACTCACGGTGTCTCCTCCTCCATCATCTCCATCATCCCCACCTTCATCTTCTACCCCAGGTGGCAGCTCAAAAAAGACTTGGATATATGCAGTTGTCGGAGCTGTCGGAGGTATTGCCTTGATATCACTCCTTCTCCTTGGTATACTTGTTATCAGTAAACGGTATCCTAGGAGCGAAAAGAAAGATGATTCTGCAATAGTATCAAAGAGTTTCGAGGCAACAGAGAAACCAGAAGGAAAAAAGGTCGGGGAAGAGTCTGAAACATTGTCGGAGATAATATCCGGCATAGCTCAGTCTTTCAAAGTGTACGGATTCAAGGAACTACAGCATGCAACGGACAATTTCAGTTCAAGCTGCTGCATCAAAGGGGGGAGTGTTTATCGCGGAATGATTAATGGTGATTTAGCCGCTATTAAAAAGATAAATGGCGATGTGTCGAAAGAGATAGTAATTCTGGACAAAGTCAACCACTCTAATGTTATACGCCTTTCTGGGGTCAGCTTCAATGAGGGCCATTGGTTTCTGGTTTATGAATATGCCACTAATGGATGCTTGACTGATTGGATCTATGTCAACAACTCGGACGGAAAGTTTTTGACTTGGAGTCAGAGAATGCAGATAGCATTGGACGTGGCCACAGGACTTGACTATCTCCATAGTTTCACTTCTCCTCCTCTTATCCACAAGGATCTCAAAACTGATAATATCCTTCTGGATACTCATTTGAGGGCCAAGATTGCCAACTTGGGGCTTGCAAGGTCAGTAGAAGGAGAGGGTGATGAATTTCCCATGACGAGGCATATTGTTGGAACAAGAGGCTATATGGCTCCTGAGTATCTAGAAAATGGAATAGTCTCTACAAAACAAGATGTGTATGCTTTTGGGGTTGTGATGCTGGAAATGTTAAGTGGAAAAGAGGTTGCTACAATTCATTCAGAAGATAAAGAGAGTTTATGGGATGTTTTAGGTGTCATTCTTAATGGGGGCGAAGAAGAGAAGCTGAGGGATTTTATGGATCCTTGCCTGATTGGAAAGTTTCCATTGGAACTTGCAGTGTATGTGATTAGAATGATTGATAATTGCTTGAGGAAAGATCCAGCGAGTCGCCCTGCCATGCATGAAATAGTGTCGTCTCTCTCTGTAATGTTGAACTCTTCATTGGCCTGGGAAAGATCAGTGATCATATCAGGAGATCATAACTTAAGCAGGAGCTCTTGA 1935 0.431 MRLFLLIPIFSSALFFCFPLVLGQQPYIGLYTTHCYKGAKSNSIRGYTCNGVAHSCQAYLTFRSQPLYYSVHTISALLGSDPSQLSEINSVSLNATFPQNQMVIVPVNCSCSSDYYQTNTSYTVHNTETYFLIANDTFQGLSTCRALINQNDIPGDLFPGTKLTVPLRCACPTKNQTDKGVKYLLSYLVTWGNSVSVISERFGVPNDLTLESNSLSEQGVIYPFTTLLVPLQHKPNISKLTVSPPPSSPSSPPSSSTPGGSSKKTWIYAVVGAVGGIALISLLLLGILVISKRYPRSEKKDDSAIVSKSFEATEKPEGKKVGEESETLSEIISGIAQSFKVYGFKELQHATDNFSSSCCIKGGSVYRGMINGDLAAIKKINGDVSKEIVILDKVNHSNVIRLSGVSFNEGHWFLVYEYATNGCLTDWIYVNNSDGKFLTWSQRMQIALDVATGLDYLHSFTSPPLIHKDLKTDNILLDTHLRAKIANLGLARSVEGEGDEFPMTRHIVGTRGYMAPEYLENGIVSTKQDVYAFGVVMLEMLSGKEVATIHSEDKESLWDVLGVILNGGEEEKLRDFMDPCLIGKFPLELAVYVIRMIDNCLRKDPASRPAMHEIVSSLSVMLNSSLAWERSVIISGDHNLSRSS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1920 644 FunFam PTI1-like tyrosine-protein kinase 3 419 632 - -
Mibi12g1920 644 Gene3D Phosphorylase Kinase; domain 1 323 418 - -
Mibi12g1920 644 ProSiteProfiles LysM domain profile. 185 229 IPR018392 -
Mibi12g1920 644 Pfam LysM domain 187 230 IPR018392 -
Mibi12g1920 644 Pfam LysM domain 122 166 IPR018392 -
Mibi12g1920 644 Gene3D Transferase(Phosphotransferase) domain 1 420 632 - -
Mibi12g1920 644 SUPERFAMILY Protein kinase-like (PK-like) 337 618 IPR011009 -
Mibi12g1920 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mibi12g1920 644 SMART serkin_6 354 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1920 644 MobiDBLite consensus disorder prediction 238 261 - -
Mibi12g1920 644 Pfam Protein kinase domain 363 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1920 644 ProSiteProfiles Protein kinase domain profile. 310 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1920 644 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1920 Mibi-ChrMibi12 35523527 35525461 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1920 23 631 Receptor kinase-like Gene Family AT2G23770 44.337 8.09e-171 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi12g1920 Pkinase 8.1e-41 CL0016