Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1916 ATGTTCACTTTCCCTCCCGCCGCGTCTTCCGAACTGTTAGAACAACAACCCTTGACGACGTTTCGACCGTTCACCAGGCCCAGTGAATGGTACGGACAAGAACAACACAACCACCGAAACCAGCTGAGTCCTCATAGTGATAATCATAATCATCAGCGCGGTCAGATTCCAAGCATGAATGCCGCGGATTCAGCTGCGGCCATGCAGCTTTTTCTGATGAACCCTCAAGCCAGATCGCCTTCACCTCCTCCTCCTCCTCCTCCTCCTCCTCACAATAATAACAATAATCCTTCCTCTTCTCTCCATGAATTCCCAGTTGCAGGAGGAGGAGGTGGGGGGCCTTTTGGTCAATTCACCTGGCTCCCATTTTCAGAAGCAGCCTCTCATCATCATCATCATCATCAACCAGTAGTAGTAACCAACACAAACACAAACACAAACAGCAACAACCACAATAATCCAGGTGAAATCGGAGGCGTCGTGGCGGGTCAAGGTCTTTCCTTATCCTTGTCGTCTTCCTTAGAAGCGGCCAAGGCGGAGGAACTCAGGATCGGCGGCGGAGATGGAGGGTTTCTTGGCTATTACGGTCAAACTCAGAATCATCAGAGTCAAGCATTGCATTTACAAGGGGTTGTTCAGAACAACAACAACCAGGTACATGGTGGTGGTTTTGGGTCATCTTTGGGGATTGCCAATGTGCTGAGGAATTCCAAGTATGTGAAGCCTGCTAAGGAATTGCTTGAAGAGTTTTGTAGCATTGGGAGGGGTCACTTCAAGAAGAACAAGTTCACCCGCCAGAATTCCAACCCTAATTCCAATTCCGCCGCCGCTTCCTCGTCATCCTCCAAAGATCCTCCGCCGTTGTCCGCCGCCGACAGGATTGAGCATCAGAGAAGGAAGGTCAAACTACTATCCATGCTTGACGAGGTGGACCGAAGATACAGTCACTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTTGACTTGGTGATGGGATTTGGGGCGGCGGTGCCGTACACGGCGCTAGCACAGAAAGCAATGTCAAGGCATTTCCGGTGTCTGAAGGACGCCATATCAGCACAATTGAAGCAAAGTTGTGAATTGCTGGGAGAGAAAGATGGGTTAGGTTCATCAGGTTTGACTAAAGGAGAGACACCAAGGCTGAAGCTTCTTGAACAAAGCCTTAGGCAACAGAGAGCCTTCCACCAAATGGGCATGATGGAGCAGGAGGCTTGGAGACCCCAACGAGGCCTTCCTGAACGTTCTGTCAACATTTTAAGAGCCTGGCTTTTCGAGCATTTCCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGCCTATCCAGAAATCAGGTATCAAACTGGTTCATTAACGCAAGGGTAAGGTTGTGGAAACCCATGGTAGAGGACATGTATCAACAAGAGCTTAAAGAAGATGATGATGATGATATTGAAGCAGAAGAGAGAGAAATGAACCAAAGTAACACCACTAGCAACAATAGTGGTAACATGGCACAAACTCCAACAACCACCACGACGTCGGTGTCGGCGCCACCAGCTAAAGGATCCGACGTTAATAATAATGCCTCAGAAAGAGACCCCTCACTAATGAATAGACAGGGCCTCTCGGAAAACCAACAGCCGTCGGCCTCAGAGGCGGCGCCGCCCATTTCCCAACGTTTCCGATCAGACCTGCCACTGCACGGTCATGATGAGGACACGTGTCGGCATGGCAGCGTGGTGGCAGGACAAGACTGTGGGACCACCTCGGCGAGTGGTAACAGTATTGGAGCTACTCTGATTAGGTTCGGGACCACCGCCGGTGATGTGTCGCTGACCCTAGGGCTACGCCACGCCGGCAACATCCCTGACACCTCTCCTTTCTCTGTTAGAGATTTTGGAGGCATTTGA 1932 0.5047 MFTFPPAASSELLEQQPLTTFRPFTRPSEWYGQEQHNHRNQLSPHSDNHNHQRGQIPSMNAADSAAAMQLFLMNPQARSPSPPPPPPPPPHNNNNNPSSSLHEFPVAGGGGGGPFGQFTWLPFSEAASHHHHHHQPVVVTNTNTNTNSNNHNNPGEIGGVVAGQGLSLSLSSSLEAAKAEELRIGGGDGGFLGYYGQTQNHQSQALHLQGVVQNNNNQVHGGGFGSSLGIANVLRNSKYVKPAKELLEEFCSIGRGHFKKNKFTRQNSNPNSNSAAASSSSSKDPPPLSAADRIEHQRRKVKLLSMLDEVDRRYSHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAISAQLKQSCELLGEKDGLGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEDDDDDIEAEEREMNQSNTTSNNSGNMAQTPTTTTTSVSAPPAKGSDVNNNASERDPSLMNRQGLSENQQPSASEAAPPISQRFRSDLPLHGHDEDTCRHGSVVAGQDCGTTSASGNSIGATLIRFGTTAGDVSLTLGLRHAGNIPDTSPFSVRDFGGI 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1916 643 CDD homeodomain 413 474 IPR001356 GO:0003677
Mibi12g1916 643 MobiDBLite consensus disorder prediction 77 94 - -
Mibi12g1916 643 SMART prehox3 228 361 IPR006563 -
Mibi12g1916 643 MobiDBLite consensus disorder prediction 261 295 - -
Mibi12g1916 643 MobiDBLite consensus disorder prediction 263 286 - -
Mibi12g1916 643 Pfam Homeobox KN domain 430 469 IPR008422 GO:0003677|GO:0006355
Mibi12g1916 643 SMART HOX_1 413 477 IPR001356 GO:0003677
Mibi12g1916 643 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 101 502 - -
Mibi12g1916 643 MobiDBLite consensus disorder prediction 75 110 - -
Mibi12g1916 643 MobiDBLite consensus disorder prediction 9 23 - -
Mibi12g1916 643 MobiDBLite consensus disorder prediction 495 562 - -
Mibi12g1916 643 MobiDBLite consensus disorder prediction 498 562 - -
Mibi12g1916 643 MobiDBLite consensus disorder prediction 1 56 - -
Mibi12g1916 643 Gene3D - 416 478 - -
Mibi12g1916 643 Pfam Associated with HOX 233 360 IPR006563 -
Mibi12g1916 643 FunFam BEL1-like homeodomain protein 4 416 478 - -
Mibi12g1916 643 ProSiteProfiles 'Homeobox' domain profile. 410 473 IPR001356 GO:0003677
Mibi12g1916 643 SUPERFAMILY Homeodomain-like 414 480 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1916 Mibi-ChrMibi12 35418043 35423579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1916 228 641 Homeobox Transcription Factor Family AT2G23760 54.508 3.47e-153 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mibi12g1916 POX 4.3e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1916 12 35418043 35423579 Mibi10g0090 10 1530618 1536999 CCT
Mibi12g1916 12 35418043 35423579 Mibi12g1916 12 35418043 35423579 ECH
Mibi10g0090 10 1530618 1536999 Mibi12g1916 12 35418043 35423579 ECH