Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi12g1913 | ATGGAAGTGCTTCCGTGTTCTGGTGTTCAATATGCTGCAGAATCTGATGGCCCTCAACAGAGTTCAGTAACACCTTTTGTCTATGAGGGAGAACCGAATTGCTCTGAAAGTGGTGGACGAGTTGAATTGAAGGATGGTCAACTTAATGACTCAGCACTTAAAATGAAAGGTCCTCAGGGGGAAGGGCAGGAGGCAGTTGGCAAACTGTCGCTTAATCCGGATTGGCAGTGCAATGGAGCCTCAAACGGTGAATGTCAAGCTGTAGATCAAAAGGAATCTTCTAGTTCCCACGCTTTTGATGAGGATGAGATGGATGAACCTTGCTTAACCTCAGAGAACCCTATTCCATTTGTGGATACAATGGAAGGTGAATCACCAAATAGCAGTAGGGATGGAGAGGTGCCACTTGCTGAACCCAGCTGGCTTGAGGGGGATGAGTCTGTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGCATCAGATGTGCAAGGGCTGATTGGCCTTTATCAACTTTGAAAGCAAAACCTACACATGGCCGGAAGAATTATTTTGTGATATTTTTTCCACACACAAGGAATTATTCTTGGGCTGACATGATGCTTGTTTGTTCAATTAACGAGTGTCCTCAGCCTATCGCATATAAGACCCATCAAGCAGGATTGAAAATGGTGAAAGATTTGTCTGTTGCCCGGCGGTTTATAATGCAAAAGCTAGTCGTTGGTATGTTGAACATCATTGATCAATTTCACTTGGATGCTTTAAATGAAGCTGCTCGTGATGTGACATTCTGGAAGGAATTTGCTTTGGAGGCTTCCCGAAGTAATGGTTATTCTGATCTGGGAAGAATGCTTCAAAAGCTGCAAAATAGCATAATGCAGCGCTACATAAATGCTAACTGGTTACAACATTCTTTTCCCATTTGGATTGATCAATGCCAGAATGCAAGCAGTGCTGAATTGGTAGAATTGCTAAAGGAGGAATTGTTTGATTCTATAATGTGGAATGATATCGGCACCCTATGGGATGCTCCAGTGCAACCGATATTGGGTTCTGAGTGGAAAACGTGGAAGCATGAAGTGATGAAATTGTTTTTTACCTCTCCTTCATTATCTAGCAGTAAAGACATGCTACAGCAGCAGAACTCTGATGACCCCCTCCAAGCAAGCCTCCAAGTTTGTCGAAAAAGACCGAAGCTTGAAGTTCGTCGTGCAGAGATTCATGCTTCCCAAGTAGAAACTAAGGGTTCAGATCACTCTGTTGCACTTGAGACTGACTCAGGCTTCTTTAATAATCAGGACACAGTGAATACATTAGTAGCTGAGAGTTGTAAACAGGAAGAGCTTAGGGAGGCACCTATCCCAATTGATTCATCAGGTAATTTAGCAAACAAATGGAATGACATTGTTGTCGAGTCTGCTGCAGATTCTGAGTTCTTGCATACCAAAGCCATGGAATCAACACCTACCAATGGGATTGTTGGTCCCAAATCTGTAGAACCTGGTAGTAAGAATCGACAATGTGTAGCTTATATCGAAGCCAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTTTACTGTTGTGTGCATTTGTCCTCTCGGTTTTTAGGCAGCTCTGCTAGAGCAGAAAGACCTGTTTCAGTTGATGCTCCTATCTGTGAAGGCACAACTGTTCTTGGCACCAGATGCAAGCATCGAGCCCTTCCTGGCTTCTCATTCTGTAAGAAACACAGGCCCCACGCTGAAGCTGACCACACTCCAAATTTACCCCCGACTTCCCTGAAAAGGAAGCATGAAGAAAATTATACTGTTTCAGAGAGCATGTACTGCAAAGACATAGTACTGGCAGATGCTGAAAGTCCTTTGCAAGTGGATCCAGTTTCAGCCATGGATGATGATACCTTCCATGGAAACAGTAACTTGAATGGGAAACCCATGCATTTTGGGAATGATCATAAGGCAATGGAGGAACTTTACTGCATAGGATCGTCTCCATTTGATGACAAGAACCCCTGTTTGGAAACTCCAAAGCGGTATTTCTTGTATTGTGAAAAGCACCTGCCAAGTTGGCTCAAACGTGCGCGAAATGGGAAGAGTAGAATAATATCAAAAGAAGTGTTTGCAGAACTTTTGAGGGACTGCTCCTTACAGGAGCAGAAAGTTAATTTACATAAAGCATGTGAGCTTTTTTACAGGCTATTTAAAAGCATTTTATCCCTAAGAAACCCAGTTCCGAAGGAAGTTCAATTCCAGTGGGCTTTGACTGAAGCTTCTAAAGATACTAATGTCAGAGAATTTTTTAAAAAGTTGGTTTGTAGTGAAAAAGAGAGAATCAAAATGATCTGGGGATTCAACGATGATAAAGATGCACCTTCACTCTTGGAAGAAATACCTCAGTTGCCATCCACTGTTAATGATAGCTTTGGTAATGACAATGTCATTGAATGTAAGATATGCTCTGCTGAATTTCCTGATGACCAAACACTTGGCAGCCATTGGATGGAAAACCATAAAAAGGAATCACAGTGGCTGTTTAGAGGCTATGCATGTGCTATTTGCCTGGATTCCTTTACCAACAAGAAAGTCTTGGAAAACCATGTCCAGGAGAGACACCATGTGCAGTTTGTTGAGCAATGTATGCTTTTGCAGTGTATTCCTTGTGGTAGTCATTTTGGAAATACTGAACAGCTATGGGTGCATGTTCTTTCAGTTCATCCTGTTGATTTTAAGGCATCAAAAGCTCCTAAGCAGCAAACTTTGTCTACTGCTGAGGGCTCTTCAATACAACTAGATGCGGAGCAGGTGAAGTCAGCCTCTTTGGAGAATAGTTTGGAGAATTCAGGTGGTTCACGGAAGTTTATTTGTAGGTTTTGTGGGTTAAAGTTTGATTTACTACCTGACCTTGGTCGCCACCATCAAGCTGCCCATATGGGGCCTAATTTAGTTAGCAGCCATCCCTCAAAGAAGGGAGTTCGTCATTATGCGTATAGATTAAAATCTGGCAGACTTAGTCGTCCTAGATTGAAAAAAAGTTTGGTATCAGCATCATATCGGATCAGAAGTAGAGCTAGTGCTAATTTAAAGAGACGCATCCAAGCGACAAAGCCGCTTGGCATTGGGGGAATAACTATACAACCTCAAGTAACTGAGTCAACAAATATTGGTAAGTTGGCAGAATATCAGTGCTCTGCGGTTGCTAAGATTTTGTTTTCTGAGATCCTAAAGACAAAGCCTCGGCCAAACAATCATGAAATCCTATCAATTTCTCGCTCTGCCTGCTGCAAAGTTGGCCTTCAAGCTGCACTGGAGGAGAAATTTGGAACCCTACCTGAAAAGTTGTATTTGAAGGCTGCAAAACTTTGCAGTGAGCATAATATTTTAGTGAGTTGGCACCAGGAAGGGTTTAATTGTCCTAGAGGTTGCAAGTTGTTGAATGACCAACCTTTGCTTCCTTACTTAGCATCTCTTCCTAATGGTTTTGCGAAGCAAAAGGCTTTAAATTTCTCAGATCCTGTGGCAGACGAGTGGGAGGTGGATGAGTTTCATTACACCATCAATTCACACCATTTAAAACCGGAATCCTTGCAAAAGGCTGTGGTCTTATGTAATGACATAAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTAATAGATCAAGAACTTCAAAATTCTCTTCATATGTGTGGGTCAAATGAACATGATATGAATCTTTCTATGCCATGGGAGAGATTTACCTATATTACGAAGCCAATGCTTGATCAATCCCTGAATCTTGATTCAGAGAGTCTGCAATTGGGATGTTCTTGTTCATATTCTACTTGCAGTCCTGAAACTTGTGCTCATGTGTACCTTTTTGATAATGACTATGAAGATGCAAGGGACATATTTGGAAAATCAATGCGTGGAAGATTCCCATACGATGCGAATGGTCGTATGATTTTGGAGGAAGGTTACCTAGTCTACGAATGCAACTATAGGTGCAGATGTAATAAAGCCTGTCCAAACAGAATTTTGCAAAATGGAGTTCGAGTTAAATTGGAAGTTTTTAAAACAGAGAAAAAGGGATGGGCTGTAAGGGCTGGTGAAGCCATCCTACGTGGCACATTTGTTTGTGAGTTTGTTGGAGAGGTTTTAAATGAGCAGGAGGCACATAACAGGCGCAAGAGGTATGGCACAGAAGGTTGCAGTTATTTCCTCAATATTGATGCTCATATTAATGATATGAGCAGATTGATAGAAGGACAAGGTCGTTATGTTATTGATGCTTCAAGATATGGAAATGTCTCGAGGTTCATCAATCATAGCTGCTCGCCCAATCTTGTGAATCACCAAGTTCTCGTAGAAAGCATGGACTGTGAACGTTCACATATTGGTCTTTATGCAAGTCAAGATATTGCATTGGGGGAAGAACTGACGTATGATTATCATTATGAGCTTCTGCCTGGGGAAGGTTCTCCTTGCCACTGTGGATGTTTGAACTGCCGGGGACGCCTTCACTGA | 4515 | 0.4228 | MEVLPCSGVQYAAESDGPQQSSVTPFVYEGEPNCSESGGRVELKDGQLNDSALKMKGPQGEGQEAVGKLSLNPDWQCNGASNGECQAVDQKESSSSHAFDEDEMDEPCLTSENPIPFVDTMEGESPNSSRDGEVPLAEPSWLEGDESVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHGRKNYFVIFFPHTRNYSWADMMLVCSINECPQPIAYKTHQAGLKMVKDLSVARRFIMQKLVVGMLNIIDQFHLDALNEAARDVTFWKEFALEASRSNGYSDLGRMLQKLQNSIMQRYINANWLQHSFPIWIDQCQNASSAELVELLKEELFDSIMWNDIGTLWDAPVQPILGSEWKTWKHEVMKLFFTSPSLSSSKDMLQQQNSDDPLQASLQVCRKRPKLEVRRAEIHASQVETKGSDHSVALETDSGFFNNQDTVNTLVAESCKQEELREAPIPIDSSGNLANKWNDIVVESAADSEFLHTKAMESTPTNGIVGPKSVEPGSKNRQCVAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSARAERPVSVDAPICEGTTVLGTRCKHRALPGFSFCKKHRPHAEADHTPNLPPTSLKRKHEENYTVSESMYCKDIVLADAESPLQVDPVSAMDDDTFHGNSNLNGKPMHFGNDHKAMEELYCIGSSPFDDKNPCLETPKRYFLYCEKHLPSWLKRARNGKSRIISKEVFAELLRDCSLQEQKVNLHKACELFYRLFKSILSLRNPVPKEVQFQWALTEASKDTNVREFFKKLVCSEKERIKMIWGFNDDKDAPSLLEEIPQLPSTVNDSFGNDNVIECKICSAEFPDDQTLGSHWMENHKKESQWLFRGYACAICLDSFTNKKVLENHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWVHVLSVHPVDFKASKAPKQQTLSTAEGSSIQLDAEQVKSASLENSLENSGGSRKFICRFCGLKFDLLPDLGRHHQAAHMGPNLVSSHPSKKGVRHYAYRLKSGRLSRPRLKKSLVSASYRIRSRASANLKRRIQATKPLGIGGITIQPQVTESTNIGKLAEYQCSAVAKILFSEILKTKPRPNNHEILSISRSACCKVGLQAALEEKFGTLPEKLYLKAAKLCSEHNILVSWHQEGFNCPRGCKLLNDQPLLPYLASLPNGFAKQKALNFSDPVADEWEVDEFHYTINSHHLKPESLQKAVVLCNDISFGKESVPVICVIDQELQNSLHMCGSNEHDMNLSMPWERFTYITKPMLDQSLNLDSESLQLGCSCSYSTCSPETCAHVYLFDNDYEDARDIFGKSMRGRFPYDANGRMILEEGYLVYECNYRCRCNKACPNRILQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEFVGEVLNEQEAHNRRKRYGTEGCSYFLNIDAHINDMSRLIEGQGRYVIDASRYGNVSRFINHSCSPNLVNHQVLVESMDCERSHIGLYASQDIALGEELTYDYHYELLPGEGSPCHCGCLNCRGRLH | 1504 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi12g1913 | 1504 | ProSiteProfiles | Pre-SET domain profile. | 1270 | 1346 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Mibi12g1913 | 1504 | ProSiteProfiles | Post-SET domain profile. | 1488 | 1504 | IPR003616 | - | |
Mibi12g1913 | 1504 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 888 | 909 | IPR013087 | - | |
Mibi12g1913 | 1504 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 820 | 841 | IPR013087 | - | |
Mibi12g1913 | 1504 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 957 | 985 | IPR013087 | - | |
Mibi12g1913 | 1504 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 959 | 980 | IPR013087 | - | |
Mibi12g1913 | 1504 | ProSiteProfiles | SET domain profile. | 1349 | 1481 | IPR001214 | GO:0005515 | |
Mibi12g1913 | 1504 | Pfam | Zinc finger C2H2-type, 3 repeats | 854 | 981 | IPR040689 | - | |
Mibi12g1913 | 1504 | SMART | c2h2final6 | 886 | 909 | IPR013087 | - | |
Mibi12g1913 | 1504 | SMART | c2h2final6 | 852 | 875 | IPR013087 | - | |
Mibi12g1913 | 1504 | SMART | c2h2final6 | 818 | 841 | IPR013087 | - | |
Mibi12g1913 | 1504 | SMART | c2h2final6 | 957 | 980 | IPR013087 | - | |
Mibi12g1913 | 1504 | Gene3D | Classic Zinc Finger | 818 | 875 | - | - | |
Mibi12g1913 | 1504 | SMART | set_7 | 1349 | 1487 | IPR001214 | GO:0005515 | |
Mibi12g1913 | 1504 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Mibi12g1913 | 1504 | Pfam | SET domain | 1360 | 1480 | IPR001214 | GO:0005515 | |
Mibi12g1913 | 1504 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 852 | 875 | IPR013087 | - | |
Mibi12g1913 | 1504 | Pfam | Pre-SET motif | 1209 | 1341 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Mibi12g1913 | 1504 | SUPERFAMILY | SET domain | 1198 | 1494 | IPR046341 | - | |
Mibi12g1913 | 1504 | SMART | preset_2 | 1206 | 1333 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Mibi12g1913 | 1504 | MobiDBLite | consensus disorder prediction | 13 | 28 | - | - | |
Mibi12g1913 | 1504 | Gene3D | SET domain | 1185 | 1484 | IPR046341 | - | |
Mibi12g1913 | 1504 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 | 1 | 1504 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi12g1913 | Mibi-ChrMibi12 | 35386228 | 35394978 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi12g1913 | 131 | 1503 | C2H2 Transcription Factor Family | AT2G23740 | 50.968 | 0.0 | 1380 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Mibi12g1913 | Pre-SET | 2.7e-15 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi12g1913 | 12 | 35386228 | 35394978 | Mibi12g1913 | 12 | 35386228 | 35394978 | ECH |