Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1902 ATGTTTCTTTACCAGAAAAGTTTCTATATTCTCCTCACACTCTTCATGATTCACTCAACAAAAGCCGAAAACCAGAGCACATGCCAGAGCAGGTGTGGACAAAATTCGTTGCCATATCCTTTTGGGTTCTCTGAAGGTTGCCAAATCCAATTGAACTGCAGCCTCAACAATAACCAAATGCAAATAAAGGAATTTATGGTTCAGAACGTAACATCTAGCAGCATATTCATCTATATTCCTGCAAAATGCAACCGTAGCTTGCAATCTATTGAGCCCCTTTTCACTTCCAAATTTGCTCCCACAGATAAAAACAGCTTTCTAGTGCAAAATTGTTCATCTGCACTTGGCGGCTGTGTTATACCCACCTCAAGTTTCACTAGCAATCAGATGAAGTTGGATGGATGTGATAACAGAAGTGATAATATAAGTTGCTTTGCACAAAGCCAAGGCCAAGGAGGTTTTGATGTTATGAGATTTGAGGATGTGATTCAAAGTGGGTGCAAATACTTGTTCTCTTCTTTTGCTGTTGAACAGAGGAAAGAAGACCCAGATGTTTCCCTCCAGTTTCAGTTATTAGAGCTTGGATGGTGGCTTGAAGGTCCATGCCAATGTTCTCCCAATGCAAACTGTACAAATGTCACCATTGCCGCCGGAAAGTTTGGATTCCGTTGTCACTGTCCTCAAGGTTATCACGGAGATGGGTTCTTGAATGGCACCGGTTGCCGGAGATTAGTTTCTAAGTGCAATGCTTCGTCACTGACCTCTAGTGGATGTGGAGGAGCAACTAAAGTCGGGATTCTTGTTGGAGGGATCATTGTTGGGGCTCTGATAGTGGCAATTCTCTGTTTCCTGGGTTTCTATGTACGACGTCGTTCTTATTGTTTGAAGAAGCAACTAACTGTAAAGCGCCTACTGCGAGAAGCTGCAGGAAACTCTAGTGTTCCTTTCTATCCTTATAAAGAAATAGAAAGAGCCACTAATTTTTTCTCAGAGAAGCAAAGGCTTGGAACTGGGGCTTTTGGGACAGTTTATTCAGGAAAAATCCACAATGATGATTTAGTTGCCATAAAAAAAATAAGACAGAGAGACCCCAATAGTGTTGACCAAGTCATGAATGAAATCAAGCTCCTTTCTTCTGTGAGTCACCCAAATTTAGTTCGTCTATTAGGCTGCTGCATTGAAGAGGATGAACAAATACTTGTTTATGAGTTTATGCCCAATGGAACTTTGTCTCAGCATTTACAGAGAGAGAATGGTAAAGGCCTTCCATGGACAATTCGGCTCACTATCGCCACTGAAACTGCTAATGCCATAGCGTATCTCCATTCAGCCATTGATCCTCCAATCTATCATAGAGACATAAAATCCAGCAATATTTTGCTGGATTACAACTTCAACTCAAAAGTGGCAGACTTTGGACTTTCCAGGCTTGGCATGACAGAAATATCACACATCTCAACCGCCCCACAAGGGACACCAGGCTACGTGGATCCTCAATATCACCAAAACTACCATCTTTCTGATAAAAGTGATGTATACAGTTTTGGGGTGGTTTTAATAGAGATAATAACAGCACTCAAAGTGGTTGATTTTGGTCGACCTCATAATGAGGTCAATTTAGCTGCACTGGCAGTAGATAGAATCAGAAGAGGCTGCGTGGATGAGATCATAGATCCCTTCTTAGAACCACACAGAGATGCTTGGACACTATATTCTATTCACAAAGTTGCTGAACTTGCTTTCAGATGCTTAGCTTTTCATAGTGACATGAGGCCTTCTATGATGGAAGTGGCAGAGGAACTAGACCACATCAGACTCAGTGGGTGGGTGACAATGGAGGAAACCACGTGCATGTCAACATCATCTTCTGTGGGGTCAGGTCGTTCATCGTTACCGGATAAAACTGAAAAATCGTTAAGTGATGTTCAAGTTGATAAAGATGGAGTAGAGAGTGAGAGATTGATTGTTGCTGAGAGAGCAGAGGTGAGGGATAGCTCCCCTGTATCAGTCCATGACCCTTGGTCAAGTGGACATAGCTCACCTTCAAACAATAGCTTGTTGGGAAATGCAACTCAATGA 2079 0.4223 MFLYQKSFYILLTLFMIHSTKAENQSTCQSRCGQNSLPYPFGFSEGCQIQLNCSLNNNQMQIKEFMVQNVTSSSIFIYIPAKCNRSLQSIEPLFTSKFAPTDKNSFLVQNCSSALGGCVIPTSSFTSNQMKLDGCDNRSDNISCFAQSQGQGGFDVMRFEDVIQSGCKYLFSSFAVEQRKEDPDVSLQFQLLELGWWLEGPCQCSPNANCTNVTIAAGKFGFRCHCPQGYHGDGFLNGTGCRRLVSKCNASSLTSSGCGGATKVGILVGGIIVGALIVAILCFLGFYVRRRSYCLKKQLTVKRLLREAAGNSSVPFYPYKEIERATNFFSEKQRLGTGAFGTVYSGKIHNDDLVAIKKIRQRDPNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEEDEQILVYEFMPNGTLSQHLQRENGKGLPWTIRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFNSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLIEIITALKVVDFGRPHNEVNLAALAVDRIRRGCVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPSMMEVAEELDHIRLSGWVTMEETTCMSTSSSVGSGRSSLPDKTEKSLSDVQVDKDGVESERLIVAERAEVRDSSPVSVHDPWSSGHSSPSNNSLLGNATQ 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1902 692 FunFam Wall-associated receptor kinase-like 20 405 614 - -
Mibi12g1902 692 Gene3D Transferase(Phosphotransferase) domain 1 405 618 - -
Mibi12g1902 692 MobiDBLite consensus disorder prediction 669 692 - -
Mibi12g1902 692 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Mibi12g1902 692 MobiDBLite consensus disorder prediction 634 666 - -
Mibi12g1902 692 SUPERFAMILY Protein kinase-like (PK-like) 311 601 IPR011009 -
Mibi12g1902 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Mibi12g1902 692 FunFam Wall-associated receptor kinase-like 14 296 404 - -
Mibi12g1902 692 MobiDBLite consensus disorder prediction 618 633 - -
Mibi12g1902 692 ProSiteProfiles Protein kinase domain profile. 329 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1902 692 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 678 IPR044652 GO:0004672
Mibi12g1902 692 Pfam Protein kinase domain 329 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1902 692 SMART serkin_6 329 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1902 692 Gene3D Phosphorylase Kinase; domain 1 291 404 - -
Mibi12g1902 692 MobiDBLite consensus disorder prediction 618 692 - -
Mibi12g1902 692 Gene3D Laminin 202 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1902 Mibi-ChrMibi12 35298428 35301559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1902 8 689 Receptor kinase-like Gene Family AT2G23450 56.322 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi12g1902 Pkinase 2.6e-45 CL0016