Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1898 ATGTTATGCACAGGCCAGGGGTTGAGGTCGGGATGTAATGTTGATCTTCTTTCTTTTTGGTTTTTTAGCATGTTGAACAGATCCAACGTTGCCCTTCAACATGAGGCATACGACTTGAGCATTCACCAATCTTCCCTGCCGCTTCTTCATTACAACTCTGCGCTTACAGTTGCAAGATCAGAGGTAGAGGCGGTAGATAGTGCTGCTTGTTTCGCTAGCTTAGTGATGGGGCAAACTGGAGAAAGTTGCAGAGCGTTGGAAAGACATGTGTATTGGACAGAATTTGCTCCCAACAGACACCAGTTTTTCAAGGTAATGATGGGCGATTTTAGGAACCAGCTGCTAATTCCAAGAAAGTTTGTGAGCCATTTTAAGGAGAAACTGTTGAGTACTGCAAGACTTATAGGGTCGAGTAGAAATGTGTGGAATGTAGAAATTGCAAGAACGAATGCTGATGTCGTTTTTCAGATTGGTTGGAAAAAAATTGCACATGACCACGGTTTAGCAAAAAGAAATTTCCTCGTTTTCCAATACATTGGATTCTCTTCTTTCAATGTTTCCATTTTCAATGAGACGGGATGTGAAAAAGAATGTGCTTTTTTCGTCAACAAACACATTTCATGCACTATAAATGCTTGCTCTCTTCAAAATGAGGAGGAAATGACTGATGGGGAGGAAATGAAGGGGAAGGTAAAGAGAAAGAAACTAAAAGGTAGGGAGAGAGAAATCTGA 732 0.4112 MLCTGQGLRSGCNVDLLSFWFFSMLNRSNVALQHEAYDLSIHQSSLPLLHYNSALTVARSEVEAVDSAACFASLVMGQTGESCRALERHVYWTEFAPNRHQFFKVMMGDFRNQLLIPRKFVSHFKEKLLSTARLIGSSRNVWNVEIARTNADVVFQIGWKKIAHDHGLAKRNFLVFQYIGFSSFNVSIFNETGCEKECAFFVNKHISCTINACSLQNEEEMTDGEEMKGKVKRKKLKGREREI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1898 243 ProSiteProfiles B3 DNA-binding domain profile. 99 192 IPR003340 GO:0003677
Mibi12g1898 243 Pfam B3 DNA binding domain 102 190 IPR003340 GO:0003677
Mibi12g1898 243 SUPERFAMILY DNA-binding pseudobarrel domain 97 197 IPR015300 -
Mibi12g1898 243 CDD B3_DNA 102 190 IPR003340 GO:0003677
Mibi12g1898 243 PANTHER B3 DOMAIN-CONTAINING 97 228 - -
Mibi12g1898 243 Gene3D - 95 194 IPR015300 -
Mibi12g1898 243 MobiDBLite consensus disorder prediction 224 243 - -
Mibi12g1898 243 SMART B3_2 102 192 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1898 76 204 REM Transcription Factor Family AT4G33280 35.878 2.77e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi12g1898 B3 1.3e-13 CL0405