Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1882 ATGAGTGTTGAAACATTGGTGAGATCGCGTGATAGAGATGAACGGCAAGAGAAAAGAGTATTGAAGCGTCGTTCCATCATGGCGGAAAAGGTTATAGAAATTTTGCTTGACGAACTTCTGGGCAAGGTTTTGGAGGTGAAGGAGAGGGCGATTCAGTTCAGACCAACCCTCGAACGCCTAGCTAGCACACTCACGTCAATAAAACCAGTGATCCAACAGATAAACCAATACAACAAGCAACTAGATCGATCAGAGGAAGAAACAAAGAAGTTAATTGAAGATGTGAAGGAAGGAGAAAAGCTCGTTCTCAAGTGCTCCAAAATCCAGTGGTGGGAATGCTGCTATAAGCCCCACTACCAGGAGCAACTTGAGGATTTGGATCAATCACTTTTGAGATTCTTTCAAGTTGATATGCCAGTTCAGACGGCGAGGGATATGAAGGAGACGCTCATAGAGGTGAAAGAAATTCATATGAAGATTGAAAAATTGAATGCGGTTGCGAGAAATGACAGGGAGCCTAGGGGACTGTGCTCAGCGCCGGAGCCGCCAGCGTTCACCGTTGGATTGGATGTTCATGTTGGGGAATTGAAGGTGAGGCTGCTTCAGAATGATGTGTCTGTGATAGTGATCACTGGCTCACCGGGTTCTGGGAAGACCACATTGGCCAAAAAGTTCTGTTGGGATGCTAATGTCAGAGGTAAATTCAAGGACAATATCTTCTTTGTCAAATTCTCGGAGACGCCAAAATTGAACGCTATTGTACAGAAACTATATCAGCACAAGGGTCGCTCAGTGCCTGAGCCTCAAAATGATGAAGAAGCCGTTGACCAATTGAAACTTTTGCTGAAAGAAATTGGGGAGAAACCTACACTATTGGTTCTGGACGATGTTTGGGATAGATCAGAATCTCTTGTTGATAATTTTCTTATGCAGCTGCCGGACTTTAAGATTTTAGTGACTTCTAGATTTGCAATTCGAAGATTCGGCGCTCCACATCCCTTGAAACCCCTTGGTGATGAGGATGCTGTGGAGCTTTTCCGCTACTCAGCAGAACTCAAGGAGAAAATCTTTGATATTCCCGAACATGCTGTGAGAGAGATAGTCCAAGGCTGCAGTGGTTCTCCAAAGGTACTTAATGCAATTGGCAGGTCGCTCTGTGGGCAGAATTCTGTGGTATGGCAAAGCAGGGCAAAAGAGTTGTCAAAGGGTCGTCTTATTTTTGAGACAAATGAGGATCTCCTTGCTTTTCTCCAAAAAAGCTTCGATGTCTTGTATACTTCAGTAATTAAGGAGTGTTTCATGGACTTAAGTTTATTTCCTGAAGACCAGAAGATTCCTGCAGCTTCTCTTGTTGATATGTGGGTGGAACTGCATGAAGAAGATGACATAAATGCAATGGAGAAAATTTATGAACTGGCCACCCGTAACATGGTTGACATTATCGTAAGGACTTTTGCAAGTGGCGCAGGTAACTTCAATAGCCACTTTGTTATGCGGCATGATCTTTTTCAGGAGCTAGCTATCCATCAAACACAAATTAGCCAGGAGCCACTGGGAGAGAGGAAAAGATTGATTCTTAACATAACTGGAAACGAACTTCCCCAGTGGTGGACTGAACAGAAAGAGTATCATATAGCTGCCCGCGTATTATCTATATCAACTGATGAATTATTCTCTTCTGATTGGTGCAACTTGGTACCAACTGAAGTTGAGGTTCTGCTTTTGAACCTTCGAGGAAAGAAGTACACCATACCAAGGTTTGTAGAGAAAATGAGCAAACTAAAAGTTATGTTAATCACAAATTATGGTTTCCACCCTGCTGCTGAGTTAGAGAATTTAGAACTGCTTAATTTGTTGTCCAATCTTAAAAGAATCAGACTGGAGCGTGTGTTAATTCCTTCCCTTGCTGAGAAAAGAGTGCAGCTGAAGAATCTTCAGAAACTCTCTCTGTTTATGTGCAATGTGAATGAAGCTTTCAAAAATTGCTCCATCCAAGCATCAGATATGATGCCAAACTTGGTGGAACTGAACATTGACTACTGTAATATGGTGGAATTGCCCATCGGGTTGTGTGGGACTATCTTCTTAAAGAAGCTGAGTATTACTAGTTGCCACAAGCTTTCTGCTCTTCCTGAAGAAATCGGACGGTTAGCCAATTTAGAACTGTTAAGGGTTAATTCTTGTTCTGATTTAGCAGAGTTTCCGGACTCAGTTTCCAGCCTTGATAAGCTAGAATTTCTTGACATCTCTTACTGCATAAGCCTTAGTAGATTACCGGATCATATGGGTGAGTTACATAGTTTGAAAGAGCTCTATATCACACGTTGCTCAAGATTATGTGAGTTGCCACCCACAATCATTAATCTTACGGGGCTAAGAGTTGTGGTATGTGATGAAGATATGGCTACTTTATGGGAACCTTGCAAAGCCATCCTGACTGATCTACATGTAGAGGTACCCCAAGCTGATGTTGGCCTAGAATGGCTGTGA 2490 0.4257 MSVETLVRSRDRDERQEKRVLKRRSIMAEKVIEILLDELLGKVLEVKERAIQFRPTLERLASTLTSIKPVIQQINQYNKQLDRSEEETKKLIEDVKEGEKLVLKCSKIQWWECCYKPHYQEQLEDLDQSLLRFFQVDMPVQTARDMKETLIEVKEIHMKIEKLNAVARNDREPRGLCSAPEPPAFTVGLDVHVGELKVRLLQNDVSVIVITGSPGSGKTTLAKKFCWDANVRGKFKDNIFFVKFSETPKLNAIVQKLYQHKGRSVPEPQNDEEAVDQLKLLLKEIGEKPTLLVLDDVWDRSESLVDNFLMQLPDFKILVTSRFAIRRFGAPHPLKPLGDEDAVELFRYSAELKEKIFDIPEHAVREIVQGCSGSPKVLNAIGRSLCGQNSVVWQSRAKELSKGRLIFETNEDLLAFLQKSFDVLYTSVIKECFMDLSLFPEDQKIPAASLVDMWVELHEEDDINAMEKIYELATRNMVDIIVRTFASGAGNFNSHFVMRHDLFQELAIHQTQISQEPLGERKRLILNITGNELPQWWTEQKEYHIAARVLSISTDELFSSDWCNLVPTEVEVLLLNLRGKKYTIPRFVEKMSKLKVMLITNYGFHPAAELENLELLNLLSNLKRIRLERVLIPSLAEKRVQLKNLQKLSLFMCNVNEAFKNCSIQASDMMPNLVELNIDYCNMVELPIGLCGTIFLKKLSITSCHKLSALPEEIGRLANLELLRVNSCSDLAEFPDSVSSLDKLEFLDISYCISLSRLPDHMGELHSLKELYITRCSRLCELPPTIINLTGLRVVVCDEDMATLWEPCKAILTDLHVEVPQADVGLEWL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1882 829 PRINTS Disease resistance protein signature 207 222 - -
Mibi12g1882 829 PRINTS Disease resistance protein signature 739 755 - -
Mibi12g1882 829 PRINTS Disease resistance protein signature 284 298 - -
Mibi12g1882 829 PRINTS Disease resistance protein signature 371 385 - -
Mibi12g1882 829 SUPERFAMILY RNI-like 580 795 - -
Mibi12g1882 829 ProSiteProfiles RPW8 domain profile. 21 172 IPR008808 -
Mibi12g1882 829 CDD AAA 195 330 - -
Mibi12g1882 829 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 26 161 IPR008808 -
Mibi12g1882 829 Gene3D - 421 510 IPR036388 -
Mibi12g1882 829 Coils Coil 67 101 - -
Mibi12g1882 829 SMART AAA_5 204 357 IPR003593 -
Mibi12g1882 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 436 IPR027417 -
Mibi12g1882 829 Gene3D - 337 420 IPR042197 -
Mibi12g1882 829 Gene3D Ribonuclease Inhibitor 533 811 IPR032675 -
Mibi12g1882 829 Pfam NB-ARC domain 192 405 IPR002182 GO:0043531
Mibi12g1882 829 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 28 829 IPR039203 GO:0050832
Mibi12g1882 829 Gene3D - 172 328 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1882 Mibi-ChrMibi12 35146430 35150891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1882 204 388 WRKY Transcription Factor Family AT5G45050 29.208 2.91e-09 58.9