Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1880 ATGGCAGATGGGGCAAAACTAATTGAAGGAGCTAATCTGGCAGCGGTGCTTCAAGAGTCTTTGAAGAAGATCATAGAAATGATCGAGAGGGCTCACAAGAGTTCATCCACTCTGAAATTATTCAGATCGGCCCTGAAGGAATCCACATCGTTAGTGGAAGAGATCAAAAATTTAAACGATCGCTTGAATCCGCCAAGCGAAGAAATAGAAAAGCTGGTGCAGGAAAAGGAAGCAGGGGATGACCTCGTTGGTAAGTCCCTGAGAATCCGATTGTGGAAATTGCTTATTGGAAAATCTAACAAGGGCAAGCTTGGAGAAAGGCACGGACCAATGGTGAAGTGCCTGTCTTTCAATTCGAGAGGTGAGAATAAGATGGTAAGGGATGTGAAGGAGACTCTGAAGGAGGTGAGAGAACTTCTGGAAACGATGAGCAAAGAGAATTATGAGCACGGAATTACGTGTTTGCCTCCTCAGAACCCAGAATTCGTGATCGGCATGGAAGAACCCTTGTTGAGGGTGAAGATGGAGCTCCTCAAGGACGGGCCATCCACTCTCGAGTTGACGGGTCTACCCGGATCCGGAAAGACCACATTGGCTAGAAAGCTCTGTGGGGATGACCAAGTCAAAGGTAAATTCGGAGACCATATATTGTTTGTGACCTTCTCAAAAACGCCAAACTTCAAGGTTATTGTAGAGGCGCTATTTCAACGCTGTGGGAAGAAGGTTCCTGTGTTTCATAGCGACAAAGAAGCAGCTGCAGAATTGGGACTTCTGCTGAGTGAAATATCGGGAAGTCCTATATTGTTAGTACTGGATGACGTTTGGCCTGACTCAGAATCCCTTGTTCAGAACTTCAAGTTCCAGATTCCCGATTGTAAGATTTTGATCACTTCAAGAACTGCATTTCCAACAATTAAACTTCAAATCCACTTGGCACCACTTCGTTATGATGATGCACTAACACTTTTCCGACACTTCGCTCTCGTAAAAGACAATGGCACATACACTCCCAACGAATTTCTTGTCCAAGAGGTTGTGAGAAGTTGTAAGGGCCTACCTTTGGCCATTAAAGTAATCGCTAGATCACTGTGCCAGCAGCCTCTTGAAACGTGGCAAAAGATGGTAAAGGAATGGTCACAAGGTCGTTCAATCCTTGATTCCAACGCAAATTTGCTTAAATTCCTCCAAGGAAGCTTGTCTGTTTTGGAAGATGAGTCCATCACCAAGGAGTGCTTCATGGACCTAGGGTTATTTCCCGAAGACCGAAGAATTCCTGTCACGGCTCTTGTTGATATGTGGGCGGAACTGCATAAACTAGATGATGAAGGCAGAAAAGCAATGAACATAATCAATAAATTAGTCTCCCTGAATTTGGCAAATCTCCTTGTTACAAGGAAAGTTGAAAGTGATACGGACAGTTATTACAACAACCACTTCATCATGCAGCATGACCTTCTAAGAGAGCTTGCAATTCAGCAAAGCAACCAAGAACCATTTGAACGGAGAAGAAGACTGATGGTTGACATAAATGAAAATAATCGCCCATGGTGTCAGGAGGAGGAGCAGCCGCGAGGCATTATTGCCGACATGTTGTCGAAATGCCTTAAATGGTATGTTGGACAAAAGCAGCAACCTGTCCTGGCACGGACATTATCTATATCAACTGATGAAGCATTCACTTCAGATTGGGGCAACACAAAATTAACTGAAATTGAGGTTCTAATATTGAATGTTGGTACTAAGAATTATTCCTTGCCAAAGTCCATTGAGAAAATGAGTAGTCTGAAGGTTCTAATATGCACTAATTATGGTTTTCATGCTTCCGGATTGGAAAACTTTGAGCTACTTGACTCTTTATCTAGCCTGAAAAGAATTAGACTGGAGAAGGTTTCTCTTCCTTCCCTTGGAAAATTGAAGAATCTGCAAAAATTATCCCTTTATATGTGTGATACAAGTCAGGCATTTGGGAGCTGCAAGGTACCAATTTCGGATGCATTGCCTATCCTTGTAGAATTGAACATTGACTATTGCAAGGATTTGGTGGAATTGCCTTCTGGTCTCTGTGATATCAAAACCCTCAGAAAGCTTAGTATTACTAACTGCCACAAGTTTTCTAATTTGCCCAAAGAAATAGGAAGGCTGGAGAATTTGGAACTACTGAGGCTTAATTCCTGTACTGATTTAGGAGGTATACCAGAATCGATTGGCTGGCTTTCCAGGTTACGTTTTTTTGACATTTCAAACTGCATAAGCCTAAGAAATTTACCTGAGAGCATTGGTAAATTGGGAGATATAGAGAAGTTGTACATGACAGGTTGCTCAAGGTGTGAATTGCCAGACTCGGTCATAAATCTTAATCATTTAGAAAGTGTAACATGCGATGAGGAGACAGCTGCTTCTTGGGAGTTTTTCAAACCAATGCTTTCCAATCTAAGGATTGAGGTACCGCATGTAGATGTTAACTTAAATTGGCTTCTTGGGAGTAGCTCATAG 2493 0.424 MADGAKLIEGANLAAVLQESLKKIIEMIERAHKSSSTLKLFRSALKESTSLVEEIKNLNDRLNPPSEEIEKLVQEKEAGDDLVGKSLRIRLWKLLIGKSNKGKLGERHGPMVKCLSFNSRGENKMVRDVKETLKEVRELLETMSKENYEHGITCLPPQNPEFVIGMEEPLLRVKMELLKDGPSTLELTGLPGSGKTTLARKLCGDDQVKGKFGDHILFVTFSKTPNFKVIVEALFQRCGKKVPVFHSDKEAAAELGLLLSEISGSPILLVLDDVWPDSESLVQNFKFQIPDCKILITSRTAFPTIKLQIHLAPLRYDDALTLFRHFALVKDNGTYTPNEFLVQEVVRSCKGLPLAIKVIARSLCQQPLETWQKMVKEWSQGRSILDSNANLLKFLQGSLSVLEDESITKECFMDLGLFPEDRRIPVTALVDMWAELHKLDDEGRKAMNIINKLVSLNLANLLVTRKVESDTDSYYNNHFIMQHDLLRELAIQQSNQEPFERRRRLMVDINENNRPWCQEEEQPRGIIADMLSKCLKWYVGQKQQPVLARTLSISTDEAFTSDWGNTKLTEIEVLILNVGTKNYSLPKSIEKMSSLKVLICTNYGFHASGLENFELLDSLSSLKRIRLEKVSLPSLGKLKNLQKLSLYMCDTSQAFGSCKVPISDALPILVELNIDYCKDLVELPSGLCDIKTLRKLSITNCHKFSNLPKEIGRLENLELLRLNSCTDLGGIPESIGWLSRLRFFDISNCISLRNLPESIGKLGDIEKLYMTGCSRCELPDSVINLNHLESVTCDEETAASWEFFKPMLSNLRIEVPHVDVNLNWLLGSSS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1880 830 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 6 825 IPR039203 GO:0050832
Mibi12g1880 830 Gene3D - 395 491 IPR036388 -
Mibi12g1880 830 Pfam NB-ARC domain 168 379 IPR002182 GO:0043531
Mibi12g1880 830 Gene3D - 128 304 IPR027417 -
Mibi12g1880 830 PRINTS Disease resistance protein signature 712 728 - -
Mibi12g1880 830 PRINTS Disease resistance protein signature 184 199 - -
Mibi12g1880 830 PRINTS Disease resistance protein signature 261 275 - -
Mibi12g1880 830 PRINTS Disease resistance protein signature 349 363 - -
Mibi12g1880 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 415 IPR027417 -
Mibi12g1880 830 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 6 114 IPR008808 -
Mibi12g1880 830 Gene3D - 314 392 IPR042197 -
Mibi12g1880 830 Gene3D Ribonuclease Inhibitor 548 815 IPR032675 -
Mibi12g1880 830 SUPERFAMILY L domain-like 483 792 - -
Mibi12g1880 830 Coils Coil 126 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1880 Mibi-ChrMibi12 35140888 35144845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1880 189 789 WRKY Transcription Factor Family AT5G45050 24.098 1.72e-14 76.3