Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1874 ATGGATCCTTCGCCGATGACTTTGGGACCAGCCATGGACATGCCAATCATGCACGATAGTGACCGCTACGATTTCGTCCGAGATATTGGGTCCGGGAATTTCGGGGTGGCTAGGCTCATGAGAGACAAGCAAACCAAAGAGCTCGTCGCTGTTAAGTATATCGAACGCGGGGATAAGATAGATGAAAATGTGAAGAGGGAAATCATTAATCACAGGTCTCTGAGACACCCTAATATTGTTAGGTTCAAGGAGATCATTTTAACGCCTACTCATCTAGCTATTGTCATGGAATATGCATCTGGAGGAGAACTCTTTCAGCGAATCTGCAATGCTGGACGCTTTCCTGAAGATGAGGCTCGTTTCTTCTTTCAACAACTCATTTCCGGGGTCAGTTATTTCCATGCAATGCAAGTATGTCATCGGGACTTGAAGCTGGAAAACACATTATTAGATGGAAGTCCAGCACCTCGTTTGAAGATATGTGATTTTGGTTATTCCAAGTCATCGGTGCTTCATTCACAACCAAAGTCAACTGTAGGAACTCCTGCATATATTGCTCCAGAAGTGTTGCTGAGGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCTTGTGGAGTGACCTTATATGTGATGCTTGTGGGATCATATCCTTTTGAAGATCCCAATGAACCAAGTGATTTTCGAAAGACTATACAGAGAATTTTGAGTGTCCAGTATTTCATTCCAGACTTCGTCCAAATATCACCTGAATGTCGCGACCTTATCTCTAGGATATTTGTTTTTGATCCTGCAGAGAGAATCACCATTCCCGAAATCTGGAACCATGAATGGTTTCTGAAGAATCTCCCTGCAGACCTGATGGATGAGAAGATACAGGGTAGCCAAGTTGAAGAGTCAGACCAACCAATGCAGAGCATTGACGTGATCATGCAGATAATATCGGAAGCTACTATACCACCTGCTGGAACCTGTTCTTTGTATCAGTTTATGGCGGACTTTGACGGAGATGACGGCATGGATGATTTAGAGTCGGACTCCGAGCTTGATATTGACAGTAGTGGGGAGATAGTGTATGCCATTTGA 1086 0.4401 MDPSPMTLGPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEIILTPTHLAIVMEYASGGELFQRICNAGRFPEDEARFFFQQLISGVSYFHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGSYPFEDPNEPSDFRKTIQRILSVQYFIPDFVQISPECRDLISRIFVFDPAERITIPEIWNHEWFLKNLPADLMDEKIQGSQVEESDQPMQSIDVIMQIISEATIPPAGTCSLYQFMADFDGDDGMDDLESDSELDIDSSGEIVYAI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1874 361 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Mibi12g1874 361 SUPERFAMILY Protein kinase-like (PK-like) 14 323 IPR011009 -
Mibi12g1874 361 PANTHER SERINE/THREONINE KINASE 22 302 - -
Mibi12g1874 361 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Mibi12g1874 361 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1874 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Mibi12g1874 361 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1874 361 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Mibi12g1874 361 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Mibi12g1874 361 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Mibi12g1874 361 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1874 Mibi-ChrMibi12 35099630 35103948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1874 22 283 CBL-interacting serine-threonine protein kinases AT5G25110 43.066 7.90e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mibi12g1874 Pkinase 2.2e-70 CL0016