Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1871 ATGGATTTGAGCTTGGATTTGAGTCTGCCTTTTGTCCCCAAAACCATTTCTGAGTTTCTCAGCGAGGTCTCTAAAATCGGAGATAGGCACGAGAAATTAGCGATGCTTGACGATTTTGTCCACAGATTGGAGGATGAAATGAGGAAGATCGAAGCCTTCAAACGCGAGCTTCCCCTCTGTATGCTGCTCGTAAACGATGCTGTGACTAGGTTGAAAGAAGAGAAGGTACGGTCTGGTGAAGCGCTAGATCGAGCTGAGATTGAAGAGTTCATACCATTGAAAGCAAATTCTGGAGAGAACCGACAACTAACCATGGAAAAAGATAGTTGTGACAAGAAGAATTGGATGAACTCTGCTCAACTTTGGAGCGCTGAAACCAGATTGGGAAGTGAAAATGATCGGTCTGTGCCGGAGAACCCAATTCAGTCACGGAATCTGAAAAACAGGGGAGGGGCATTTATACCCTTTAATGGGAATTTGGGTATGTCAAAGCCAGTAGTGACGAAGGAAGACAAGGAAATCTCACAAGTTCCTAGTCTTAGTTTGATGACTCCAGCTTCTGAACTAAATCTCAAAAATTCAAACACTTGTAGCAGAAATTGTTCGGGTGTGCCCTTCCTTACAGACCGGCTTGACGGCCAAGTCCAACCACAACCTCAACATTTGCAACAGAATCCTAGAAAACAAAGGCGATGCTGGTCGCCGGAACTTCACCGGCGATTTGTTGATGCCCTTCAACAACTGGGAGGAGCTCAAGTGGCCACTCCTAAACAGATTAGAGAATTAATGCAAGTGGAAGGCCTAACAAATGATGAAGTGAAAAGTCATTTGCAAAAGTACAGACTTCATGTGAGAAGACTTCCTGCTTCAACTATTAACCAAGGGAATGGCCTGTGGATGGTAGAAGATCAATGCGGAGAAAAGACAAAAGTAAACTTATCGCAGTCTAGTTCTCCCCAAGGACCTCTCCTACTTGCAGGTTCTGCTAAGGGTCTATCCAGCTCTGGAGATGGTGAAGAAGATGAGAAATCAGATTGCCAAAGCTGGAAAGGTGGGCTGCACCATCAAGCGGAAGCTGATGTACTGTCATAA 1092 0.4496 MDLSLDLSLPFVPKTISEFLSEVSKIGDRHEKLAMLDDFVHRLEDEMRKIEAFKRELPLCMLLVNDAVTRLKEEKVRSGEALDRAEIEEFIPLKANSGENRQLTMEKDSCDKKNWMNSAQLWSAETRLGSENDRSVPENPIQSRNLKNRGGAFIPFNGNLGMSKPVVTKEDKEISQVPSLSLMTPASELNLKNSNTCSRNCSGVPFLTDRLDGQVQPQPQHLQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRLPASTINQGNGLWMVEDQCGEKTKVNLSQSSSPQGPLLLAGSAKGLSSSGDGEEDEKSDCQSWKGGLHHQAEADVLS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1871 363 Gene3D - 227 284 - -
Mibi12g1871 363 SUPERFAMILY Homeodomain-like 226 286 IPR009057 -
Mibi12g1871 363 MobiDBLite consensus disorder prediction 128 146 - -
Mibi12g1871 363 MobiDBLite consensus disorder prediction 335 349 - -
Mibi12g1871 363 MobiDBLite consensus disorder prediction 128 147 - -
Mibi12g1871 363 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 228 283 IPR006447 GO:0003677
Mibi12g1871 363 Pfam Myb-like DNA-binding domain 230 281 IPR001005 -
Mibi12g1871 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 350 IPR044787 GO:0003700|GO:0006355
Mibi12g1871 363 MobiDBLite consensus disorder prediction 312 363 - -
Mibi12g1871 363 FunFam Myb family transcription factor 227 285 - -
Mibi12g1871 363 Coils Coil 68 88 - -
Mibi12g1871 363 Coils Coil 36 56 - -
Mibi12g1871 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 225 285 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1871 Mibi-ChrMibi12 35075707 35077262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1871 1 278 G2-like Transcription Factor Family AT4G37180 44.718 1.54e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi12g1871 Myb_DNA-binding 1.5e-06 CL0123