Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1869 ATGTCGTCATCGAATTCCCCGTGCGCGGCCTGCAAGTGCCTGAGGCGAAAATGCACACAAGAATGCGTGTTCGCACCGTACTTCCCACCGGACAATCCTCAGAGATTCTCTTTCGTCCACAGAGTATTCGGCGCAAGCAATGTGGCTAAGCTCCTCAACGAGCTCAACGCCGCTCAGAGAGACGACGCCGTTAAGTCCCTAGCCTACGAAGCCGAGGCCCGGCTTCGCGACCCCGTGTACGGCTGCGTGGGCCTTATCTCCGTCCTCCAGCACCGTCTCCGTCAGATCCAAATCGAACTCAACAATGCGAAGAAGGAATTAGCCACTTATATTGGTCCTCAGGCTTTTCATCAGGCCAATATGCCTCCTGCTGGAATTCTAGCACCTTCTTCTGGAATCATCCCTCAACAACAACAACAACAACAACAACATCCGTATTCTTCAAGCGGTGGTAATTATCCGTACAACGGCATGCCGCCGCCTGCGCCGATGACTAATATTCCGACCGGAGGAGGTGGTGGTCAGCTTGTGATTCGTGATCCTTCTCAACAACAGCAGCATCATCAGATCTTGGATGCTCAGCAATTGGCCGTGGCTGCTGTGGCGGTTAGGGAGCAACAGGATATGTTTAGAGGTTATGAGCAGCAGCAGCAGCAGAATCAGGAGTTTCTTAGGTTTAATGGCGGTGGTGGTTATGATTTGGGCTCGGTTTCTGGGAGTGGATTTAATAGTCATATTTCTTCAAATGCTGCTGTTTCGGCGGAGATGTCTCCTTCTTTGGCTCTTGGTGGAGGTGGTGGTGGTGGTTCGTTTGACGGCGGTTATGGCGGCCCGATGCAACCGCCGTCGGAGGCCGAACACCACCAGCAGCTTCAAGCTCAGCTAATGGTTTCCCCACAGCAGCAGCAACCATCAGAAAGCGAGGAGGGTAGGAATGGCATCTGCCTTTCTTGTTGA 957 0.5298 MSSSNSPCAACKCLRRKCTQECVFAPYFPPDNPQRFSFVHRVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQIELNNAKKELATYIGPQAFHQANMPPAGILAPSSGIIPQQQQQQQQHPYSSSGGNYPYNGMPPPAPMTNIPTGGGGGQLVIRDPSQQQQHHQILDAQQLAVAAVAVREQQDMFRGYEQQQQQNQEFLRFNGGGGYDLGSVSGSGFNSHISSNAAVSAEMSPSLALGGGGGGGSFDGGYGGPMQPPSEAEHHQQLQAQLMVSPQQQQPSESEEGRNGICLSC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1869 318 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Mibi12g1869 318 MobiDBLite consensus disorder prediction 285 312 - -
Mibi12g1869 318 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mibi12g1869 318 MobiDBLite consensus disorder prediction 261 318 - -
Mibi12g1869 318 Coils Coil 86 106 - -
Mibi12g1869 318 MobiDBLite consensus disorder prediction 133 154 - -
Mibi12g1869 318 MobiDBLite consensus disorder prediction 133 166 - -
Mibi12g1869 318 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1869 Mibi-ChrMibi12 35058536 35059492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1869 1 314 AS2 family AT5G66870 46.939 2.75e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi12g1869 LOB 1.8e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0122 10 1901210 1901947 Mibi12g1869 12 35058536 35059492 CCT
Mibi12g1869 12 35058536 35059492 Mibi12g1869 12 35058536 35059492 ECH