Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1868 ATGCGTTGGTTACCTTCCATTTCCCTTTCCCATTCTAATGCTCCCAAATCCTCCGCCTCCTCCTCTTCCTTTTCCACCTCCGACATTGACAACTCCAAGAAGATCTCCGCCGATGCAATTCGCGGTCCCAGCGGCGGCGTTTGGCCTTTCGGCGCCGGGAAAAAGACTTCCCGCCCTAAGAAGCTTCATTCTGTAACCGATGGCGACGGAAACCGCAACGAAAAGTCCTCTCCCAGGTGGCATGATTCTCATGACGACATCATTGTGCCTCTGGTTCATTCTCCGATCCCCTTTGATCGTCAATTTTGTCGTTCCAATACAACCTCTTCGTTTTCCCCCTCCGTCGCTCCTCAACCCTTACCCTTGCCGGATTCTGCGATTTTCCGGCACAGAGACGCCGATCGCCCTTTACCTTCCCCGAAAGCTGTGCCGGTACCCAGTACCGCCGCCGTCAGAGGCGTCGTTGAGCGCGATCGAGCTGATGGCGCCATGGCCGGCGTCTCCTCTGTTTTTCGAATTCGGAGTGTGTTTGCTAGCCCTGGCGTAGGAAATAATAAGGGGCAAGCGGAAACAGGGTCATATAGGACGATGCGTCGGGAACAAAGTGGCAATGAAAGTAATAGAGAGAACTTACATATCAACGTGCTAACTAGGAGTGCTCCAGCTAGTCCTCTGAGCAGTCCCTTGGTGAGCCCGAACAATGGAAGAAGTAGTGATTTCGTTCAATATCATTATGTGTGTCCCCCGACAAATCAATATTGGTCGGCACCAGAGATGGTCACAACTGATAATACATCATCTGGGACGATGCCTCCTGCATCCTTTGATTTAACTGCATTATCCATTGATATTTCTCCTCATCACAGTCCAAGGGGAAGAAATCCTAACCAAATTGTTAAAAGCCGAAGTGGAGCTTCCTCACCAGTACGTGTACGTCCCAGGTTATCTCTTGAGACCTGGGCAGCACGTCGTGATTTCAGTGTCCCCTTCCTCACCGTTCACCCCTTACCTTTGCCCCCTGGGGCACCCTTGCTTTCCCCATCCCCTAAACTTTCCCCAACTTTGCCCAAGGCAGAGTCCTCTTCAATGAAAAGCCAGTGGCAGAAAGGGAAACTAATTGGCCGTGGTACATTTGGAAGTGTTTATGTTGCCACCAATAGACAAACTGGAGCATTATGTGCGATGAAGGAAGTAGAAATATTTCCTGACGACCCCAAATCAGCTGAGTGCATAAAACAGTTAGAGCAGGAAATCAAAGTTCTTAGCCAGCTAAAACATACAAACATTGTGCAGTATTATGGCAGTGAAACCGTTGAAGATCGGTTTTATATTTATCTTGAATACGTCCATCCTGGATCAATAAATAAATATGTTCGGGAGCATTGTGGTGCCATAACAGAATCTGTTGTTCGAAATTTTACTCGTCATATTCTTTCAGGCTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATAAAAGGGGCTAACTTGCTTGTTGATTCTACTGGGGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCACCTTACTGGACATGCAGCTGAGCTTTCTTTGAAGGGAAGTCCATACTGGATGGCTCCTGAGCTTATGCAGGCAGTGATGCAAAAGGACAACAGCTCTGATCAAGCTTTAGCTGTTGACATTTGGAGTTTGGGTTGTACAATCATAGAAATGCTCACAGGGAAGCCTCCTTGGAGCGAATATGAAGGAGCTGCGGCTTTGTTTAAGGTTATGAAGGATACCCCTCCTATACCTGAAACATTGTCATCGGAAGGTAAAGACTTCCTGAGGTGCTGCTTTATGAGGAATCCAGCGGAGCGGTCAACTGCTTCAGCTCTACTTGAACACCGGTTCTTGAAAAATGCACAACAGCCAGATGTTTCACATTCCATGCAGTCTCATAACGGAATAAATCTTATGGACAAACCCCTTTGTCCCAGTGGGCAATCTGAATATTTATCTGATCAGTTGCCAACTACAATTGTGCAAATTGCAAAAGGGAAGGCCAACGAGAGGTGA 2046 0.4746 MRWLPSISLSHSNAPKSSASSSSFSTSDIDNSKKISADAIRGPSGGVWPFGAGKKTSRPKKLHSVTDGDGNRNEKSSPRWHDSHDDIIVPLVHSPIPFDRQFCRSNTTSSFSPSVAPQPLPLPDSAIFRHRDADRPLPSPKAVPVPSTAAVRGVVERDRADGAMAGVSSVFRIRSVFASPGVGNNKGQAETGSYRTMRREQSGNESNRENLHINVLTRSAPASPLSSPLVSPNNGRSSDFVQYHYVCPPTNQYWSAPEMVTTDNTSSGTMPPASFDLTALSIDISPHHSPRGRNPNQIVKSRSGASSPVRVRPRLSLETWAARRDFSVPFLTVHPLPLPPGAPLLSPSPKLSPTLPKAESSSMKSQWQKGKLIGRGTFGSVYVATNRQTGALCAMKEVEIFPDDPKSAECIKQLEQEIKVLSQLKHTNIVQYYGSETVEDRFYIYLEYVHPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSTGVVKLADFGMAKHLTGHAAELSLKGSPYWMAPELMQAVMQKDNSSDQALAVDIWSLGCTIIEMLTGKPPWSEYEGAAALFKVMKDTPPIPETLSSEGKDFLRCCFMRNPAERSTASALLEHRFLKNAQQPDVSHSMQSHNGINLMDKPLCPSGQSEYLSDQLPTTIVQIAKGKANER 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1868 681 MobiDBLite consensus disorder prediction 184 200 - -
Mibi12g1868 681 MobiDBLite consensus disorder prediction 285 310 - -
Mibi12g1868 681 Pfam Protein kinase domain 368 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1868 681 FunFam Mitogen-activated protein kinase kinase kinase 5 364 665 - -
Mibi12g1868 681 MobiDBLite consensus disorder prediction 290 304 - -
Mibi12g1868 681 MobiDBLite consensus disorder prediction 342 363 - -
Mibi12g1868 681 MobiDBLite consensus disorder prediction 1 33 - -
Mibi12g1868 681 SUPERFAMILY Protein kinase-like (PK-like) 357 664 IPR011009 -
Mibi12g1868 681 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Mibi12g1868 681 Gene3D Transferase(Phosphotransferase) domain 1 363 652 - -
Mibi12g1868 681 ProSiteProfiles Protein kinase domain profile. 367 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1868 681 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 15 640 - -
Mibi12g1868 681 SMART serkin_6 367 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1868 681 MobiDBLite consensus disorder prediction 60 82 - -
Mibi12g1868 681 MobiDBLite consensus disorder prediction 184 209 - -
Mibi12g1868 681 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1868 Mibi-ChrMibi12 35038871 35042754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1868 145 667 MAP Kinase Kinase Kinase AT5G66850 57.679 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi12g1868 Pkinase 7.7e-68 CL0016