Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1840 ATGTCTCTCTTGGACATGGACATGCAGAAATCTTCAGGGAGTAGTGAAAGCAGTGGAATGGACACGTTCTCTATGATGATGCAAATGGAGAAGTTTCCAAATGATCAGTTCAGTGATGCTTTCTTTAACAATTCCACTGATTGCCCTGAAACTGATTCCACTAACAACATTACTGCCACTAATTCTCTCCCTCACGAGTCTCCTGATTTTTTCAACGCTACCACCCCAATTAATCATCAACAACCCACAATGGCACCGCCTTCATCATTTCTTCATCATCAACATCAATCGGACGATGTTCCAGCGAGGACGCTCAGAAATAAATATACTCCCAATAATAACAATACATCATATAGTTTCCCCTGTGGTTCAGAGAAGAGGAATTCAATGGCGGCTATGAGGGAGATGATATTCAGAATAGCAGTGATGCAGCCAATTCATATAGACGCAGAATCTGTGAAGCCACCTAAGAGAAGGAACGTGAAGATATCAAAGGATCCTCAGAGTGTGGCGGCGAGACACAGAAGGGAGAGGATAAGCGAGAGGATAAGGATTCTGCAGAGATTAGTTCCTGGTGGGACTAAAATGGACACGGCTTCTATGTTGGACGAAGCAATACATTACGTCAAGTTCTTAAAGAAACAAGTTCAGACTCTGGAACAGGTTGGGGCTAGTAGGCCCATAGGTGTTCCTTTTTCTGCTGCTAATTCATCAAGTACTGTCGATGTCAATTATTCTGATTTCTTCAGGGCACGTCAATTACCACCACCACCTCCTCCTATGGTGGGTTCTATGCAATTGCTAAGCTGA 810 0.4346 MSLLDMDMQKSSGSSESSGMDTFSMMMQMEKFPNDQFSDAFFNNSTDCPETDSTNNITATNSLPHESPDFFNATTPINHQQPTMAPPSSFLHHQHQSDDVPARTLRNKYTPNNNNTSYSFPCGSEKRNSMAAMREMIFRIAVMQPIHIDAESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGASRPIGVPFSAANSSSTVDVNYSDFFRARQLPPPPPPMVGSMQLLS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1840 269 Pfam Helix-loop-helix DNA-binding domain 173 212 IPR011598 GO:0046983
Mibi12g1840 269 Gene3D - 162 226 IPR036638 GO:0046983
Mibi12g1840 269 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 222 IPR036638 GO:0046983
Mibi12g1840 269 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Mibi12g1840 269 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 13 240 IPR045843 GO:0003700|GO:0006355
Mibi12g1840 269 MobiDBLite consensus disorder prediction 1 20 - -
Mibi12g1840 269 SMART finulus 169 218 IPR011598 GO:0046983
Mibi12g1840 269 FunFam BHLH transcription factor 166 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1840 Mibi-ChrMibi12 34755214 34756023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1840 25 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 57.000 9.17e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g1840 HLH 1.8e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1840 12 34755214 34756023 Mibi12g1840 12 34755214 34756023 ECH