Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1839 ATGAAATCTTCAACCACTAATTCCATGGACTGGGATCGAGGAGCTTCTCTTGGTACAGGAACTTTTGCTTCCGTTCACTTGGCCATTCCTAAACATTCTTCTTCTCAATTCTCATCCCCTGCAGCCGTCAAATCTGCTGGCATCTTCTCTTCTTCTTCACTCCAAAACGAACAATTCGTACTCCATAGTCTCGGACTCTGCCCCCAAATCATCAATTGTTTCGGCCATGATTCTACCTTTGAAAACGGTGTCCACTTCTATAATTTGTTCCTGGAATACGCCGCCGGCGGTAGTCTTTCTCATCAGCTCAAAATTCGCGGTGGTCGTTTGCCGGAATCCGATGTTCGCCTATACACAAGGTCCATCGTCCGAGGACTTGAACATATTCACTCAAAAGGGTTTGTCCACTGTGATATAAAGCTTCCAAATATTCTTCTATTTGCCAATGGCGATGTCAAAATTGCGGACTTTGGACTCGCAAAGAAATCAGGGGAAGAACATGGGAACGAAGATACAAAGTATGAGCTCAGGGGAACTCCTCTGTGTATGTCGCCGGAATCTGTGAATGACAATGAGTATGAATCTCCGGCTGATATATGGGCTCTTGGGTGTGCTGTGATTGAGATGGTCACAGGAAAACCCGCCTGGGATTTTAAGGATGAGTCGAATATTTTCTCGTTGTTGATGAGGATTGGGTCAGGTGAAGAATTACCTGAAATTCCCAAGTATTTGTCAGAAAACGGGAAGGATTTTATAAGAAAGTGTTTGGTGAAGGATCCCAGAAAAAGATGGACGGCGGAGCAGCTTTTAGAGCATCCATTTGTCGCCGACGAGACTGTTTCATTAGAGAGTGTTAAAGAATCGTTCACGTCGCCGAGAAGTCAGTTTGATTTTCCAGATTGGGTTTCCAACACAACCATTTCAACCCTGAATTCGCCGGAATCTGATGACTGTTGTGAGTGGAAGTTTGAATCTTCGAGCCTGTGCAGTACTTGCTTGCCGGAGGAGAGGATTCGAGAGCTGGTGATGAATCAGAGGCCAAGTTGGTCGGAATCTGACAGTTGGATCTGTGTTAGATAA 1080 0.4519 MKSSTTNSMDWDRGASLGTGTFASVHLAIPKHSSSQFSSPAAVKSAGIFSSSSLQNEQFVLHSLGLCPQIINCFGHDSTFENGVHFYNLFLEYAAGGSLSHQLKIRGGRLPESDVRLYTRSIVRGLEHIHSKGFVHCDIKLPNILLFANGDVKIADFGLAKKSGEEHGNEDTKYELRGTPLCMSPESVNDNEYESPADIWALGCAVIEMVTGKPAWDFKDESNIFSLLMRIGSGEELPEIPKYLSENGKDFIRKCLVKDPRKRWTAEQLLEHPFVADETVSLESVKESFTSPRSQFDFPDWVSNTTISTLNSPESDDCCEWKFESSSLCSTCLPEERIRELVMNQRPSWSESDSWICVR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1839 359 SUPERFAMILY Protein kinase-like (PK-like) 10 313 IPR011009 -
Mibi12g1839 359 Pfam Protein kinase domain 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1839 359 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 8 318 - -
Mibi12g1839 359 ProSiteProfiles Protein kinase domain profile. 11 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1839 359 CDD STKc_MAPKKK 10 275 - -
Mibi12g1839 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Mibi12g1839 359 SMART serkin_6 11 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1839 359 ProSitePatterns Protein kinases ATP-binding region signature. 17 44 IPR017441 GO:0005524
Mibi12g1839 359 Gene3D Transferase(Phosphotransferase) domain 1 4 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1839 Mibi-ChrMibi12 34743143 34744222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1839 9 359 MAP Kinase Kinase Kinase AT4G36950 52.113 7.82e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi12g1839 Pkinase 9.5e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1839 12 34743143 34744222 Mibi10g0157 10 2716277 2717323 CCT
Mibi12g1839 12 34743143 34744222 Mibi12g1839 12 34743143 34744222 ECH