Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1836 ATGCTTGATCCTTCCTCTCCCGCCATGAACGACCAGCTCTCCAAACCCACATCAATCTTCGGAATTCGATTATGGGTTGTGGTCGGAGTCTGTGTCGGAGCCGCCATAGTACTTGTTCTCTTCCTCATTTCAATCTGGCTCGTTTCCAAACGCTCCAAAACCAACCCTTCTACTCACAGACCTTCCATCCCACTCGTCTCCAAAGAGATCCACGAGATTAGGATCGACCATCAAAACGATTCCAAGCTAAAAGGGACTCGGATCCTAGCCGACCCGTCTCCCGAACCCGACCCGGTTCCTGGAATTGAGCGCCAGGCTTTGCTTCCGACATCGGAAGAAGAAAACCCATCTGGGATTAACAGGATTCAGTTCGAGATTGGGAAGAATCATAGGATTTCGTTCCCTGAACGTGCTCTGGCTCGGTCGTCTTCACATGGAAGTGGGGAGGTACGGCCTGTCGATCAGGTTCCTACTGTGATTCCTGAAGTCTCGCATTTGGGTTGGGGTCACTGGTATACTCTGAGAGAGCTTGAGGATGCGACGAATGGGTTCGCCGACGAGAACGTTATTGGGGAAGGCGGCTATGGAATTGTTTACCATGGTATTCTGAAGGACAATACTAATGTTGCTGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAAAGAGTTTAAGGTCGAAGTGGAAGCTATAGGACGAGTTCGGCACAAGAATTTAGTAAGGTTGCTGGGATATTGTGCTGAAGGAGCTCATAGAATGCTCGTATATGAGTACGTTGACAATGGGAACTTGGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTGAATTGGGAAATTCGGATGAACATTATTCTGGGAACAGCAAAAGGGCTAGCTTATCTTCACGAGGGGTTGGAACCAAAAGTTGTTCACCGTGATATTAAATCGAGCAACATTCTGATCGACAAGCAATGGAATTCAAAGGTGTCAGACTTTGGGCTTGCCAAACTCCTTGGCTCTGATAGCAGCTACATTACAACACGTGTCATGGGCACATTTGGCTATGTGGCTCCCGAATATGCAAGTACTGGAATGTTAAATGAACGAAGTGATGTGTACAGTTTTGGAATTCTAATTATGGAAATAATCACAGGCAGGAATCCAGTTGATTATAGTCGGCCTCAAGAAGAGGTTAATTTAGTTGACTGGCTAAAGAAGATGGTTAGTAACAGGAATGCAGAGGGAGTGTTGGATCCCAAACTCCCTGAGAAACCAAGTTCAAGGGCACTCAAGCGAGCCCTTCTTGTGGCTTTACGTTGCACTGACCTTAATGCACAAAAGCGACCTAAAATGGGGCATGTCATACATATGCTCGAGGCTGAGGATTCTCCTAACAAAGAGGATCGGAGGGCAAAAAGAGATGCGGGAAATTCAGCTAATGATGAGGATAGATCAAAAGGGGAGGCAACTGTGTCTGGTGATGATGGTAAAGTTTGA 1488 0.4691 MLDPSSPAMNDQLSKPTSIFGIRLWVVVGVCVGAAIVLVLFLISIWLVSKRSKTNPSTHRPSIPLVSKEIHEIRIDHQNDSKLKGTRILADPSPEPDPVPGIERQALLPTSEEENPSGINRIQFEIGKNHRISFPERALARSSSHGSGEVRPVDQVPTVIPEVSHLGWGHWYTLRELEDATNGFADENVIGEGGYGIVYHGILKDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLNWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPQEEVNLVDWLKKMVSNRNAEGVLDPKLPEKPSSRALKRALLVALRCTDLNAQKRPKMGHVIHMLEAEDSPNKEDRRAKRDAGNSANDEDRSKGEATVSGDDGKV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1836 495 SMART serkin_6 184 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1836 495 ProSiteProfiles Protein kinase domain profile. 184 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1836 495 Gene3D Phosphorylase Kinase; domain 1 163 259 - -
Mibi12g1836 495 FunFam Putative receptor-like serine/threonine-protein kinase 260 470 - -
Mibi12g1836 495 Gene3D Transferase(Phosphotransferase) domain 1 260 474 - -
Mibi12g1836 495 FunFam Probable serine/threonine-protein kinase At1g01540 164 259 - -
Mibi12g1836 495 Pfam Protein kinase domain 185 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1836 495 SUPERFAMILY Protein kinase-like (PK-like) 160 456 IPR011009 -
Mibi12g1836 495 Coils Coil 204 224 - -
Mibi12g1836 495 MobiDBLite consensus disorder prediction 455 495 - -
Mibi12g1836 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Mibi12g1836 495 ProSitePatterns Protein kinases ATP-binding region signature. 190 212 IPR017441 GO:0005524
Mibi12g1836 495 CDD STKc_IRAK 190 456 - -
Mibi12g1836 495 PANTHER OS01G0323000 PROTEIN 8 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1836 Mibi-ChrMibi12 34724177 34726727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1836 161 478 Trihelix Transcription Factor Family AT1G70460 44.985 2.07e-89 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi12g1836 Pkinase 3.5e-48 CL0016