Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1815 ATGAAGATGAAGATGAATATGAAGATGAAGATGAAGATTCACTCTCTCCCCCGTGAGAGAGCCATGGACGGCGGCCAGCCACCGGAAGATATAAACAGAAGCAGGAACAGAGAGATTCCGACCAGGAAAAGAGGAGGCGGCGAAGGAGGAGAGACGACAAGATACAAAGGTATTAGGATGAGGAAGTGGGGCAAGTGGGTCGCCGAGATTCGAGAACCCAACAAACGCTCTCGTATTTGGCTTGGCTCTTATTCCACCCCCGTCGCGGCGGCGCGTGCCTACGACACCGCCGTTTTCTATCTCCGAGGCCCATCCGCCCGCCTTAATTTCCCCGACCTCTTCGAAGGCGGCGGCGACTGCGACATGTCGGCGGCTTCAATCAGGAAGAAAGCCACGGAGGTCGGCGCCAGGGTCGACGCGCTTCAGGCCGCCGCCCACCACCACCGAGCCACGGTGGCGCCGGAAATAATCCCACGCGGCGCCGGCGCCGGGGAGATTCTGTCGGGGGTTGATCTGAACAAGATTCCAGAACCCGAGAATTCGGATGAATGA 552 0.5833 MKMKMNMKMKMKIHSLPRERAMDGGQPPEDINRSRNREIPTRKRGGGEGGETTRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLFEGGGDCDMSAASIRKKATEVGARVDALQAAAHHHRATVAPEIIPRGAGAGEILSGVDLNKIPEPENSDE 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1815 183 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Mibi12g1815 183 FunFam Ethylene-responsive transcription factor 2 53 112 - -
Mibi12g1815 183 Gene3D AP2/ERF domain 53 112 IPR036955 GO:0003700|GO:0006355
Mibi12g1815 183 MobiDBLite consensus disorder prediction 15 53 - -
Mibi12g1815 183 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Mibi12g1815 183 PRINTS Ethylene responsive element binding protein signature 93 113 IPR001471 GO:0003700|GO:0006355
Mibi12g1815 183 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Mibi12g1815 183 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Mibi12g1815 183 CDD AP2 55 113 IPR001471 GO:0003700|GO:0006355
Mibi12g1815 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 43 182 - -
Mibi12g1815 183 SUPERFAMILY DNA-binding domain 54 112 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1815 Mibi-ChrMibi12 34407484 34408035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1815 55 183 AP2-EREBP Transcription Factor Family AT5G67190 58.861 2.14e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi12g1815 AP2 4.9e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1815 12 34407484 34408035 Mibi10g0172 10 2961228 2961677 CCT
Mibi12g1815 12 34407484 34408035 Mibi12g1815 12 34407484 34408035 ECH