Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1808 ATGAGTATGGCCGTGGAGCTCATGATGGGTTACAGGAACGACAGCTTCGTGTCCAAAATGGATGATAATGTTGTTCAAGAAGCCGCCTCTGGCCTTGAAAGCGTCGAGAAGTTAATCAGGCTTCTTTCTCAGACTCGGCAACAATTCCAGTCTTCTTCTTCTTCCGCCTCAAAATCTTCCCTCGATATCGAGATGGACTGTAAAGCCGTCGCCGACATCGCCGTTTCCAAGTTCAAGAAGGTAATTTCTCTTCTGGGTCGAACCAGAACCGGCCATGCTCGATTTCGAAGAGCCCCTTTGCCTCAGCCGCCGCCTCCTCCTCCGCCGTCGGCGGCGGTTAATCAAAACCACGAGACACAACCTTCGGAACCCAAAATTTATTATGCGACGCCGTTACAGCAGATCCCGCCGCCACTTCTTCAACACCAAAATCTCGGTGAACAACTTCCCTTGATCCCCAAAAATGGGTTGATTGAGAGGAAGGACTCGTTTAAGACCATTAATTTCTCGTATTCCTCTGCTGCGACGTCGTTTATGTCGTCTCTTACTGGTGATACTGATAGTAAACAGCCTTCTTCGTCGTCGCCGGCGACCGCTTTTCAGATCACGAATCTGTCTCAGGTTTCCTCGGCGGGAAAGCCTCCGCTTTCTTCTTCTTCGTTGAAGAGAAAGTGTAGCTCTGAAAACTTGGGTTCCGGCAAGTGTGGCAGTTCCTCTAGTCGTTGCCATTGTTCTAAAAAGAGAAAAATGCGGTTGAAGAGGGTAGTGAGGGTGCCAGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCTTGGAGGAAGTACGGACAGAAACCCATTAAAGGATCCCCTCATCCTAGGGGATACTATAAGTGCAGTAGCGTTAGAGGGTGTCCAGCACGCAAACATGTAGAGCGAGCTCTGGATGATCCATCAATGTTGGTAGTCACATATGAAGGGGATCATAATCACTCACTTTCTGCCACTGATTCAACGAATCTCATATTGGAGTCTTCTTAG 1029 0.483 MSMAVELMMGYRNDSFVSKMDDNVVQEAASGLESVEKLIRLLSQTRQQFQSSSSSASKSSLDIEMDCKAVADIAVSKFKKVISLLGRTRTGHARFRRAPLPQPPPPPPPSAAVNQNHETQPSEPKIYYATPLQQIPPPLLQHQNLGEQLPLIPKNGLIERKDSFKTINFSYSSAATSFMSSLTGDTDSKQPSSSSPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSATDSTNLILESS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1808 342 Gene3D WRKY domain 258 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi12g1808 342 MobiDBLite consensus disorder prediction 205 240 - -
Mibi12g1808 342 SUPERFAMILY WRKY DNA-binding domain 266 329 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi12g1808 342 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 24 334 IPR044810 GO:0003700
Mibi12g1808 342 MobiDBLite consensus disorder prediction 92 121 - -
Mibi12g1808 342 Pfam WRKY DNA -binding domain 271 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi12g1808 342 MobiDBLite consensus disorder prediction 98 112 - -
Mibi12g1808 342 Pfam Plant zinc cluster domain 222 267 IPR018872 -
Mibi12g1808 342 FunFam WRKY transcription factor 65 253 330 - -
Mibi12g1808 342 SMART WRKY_cls 269 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi12g1808 342 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1808 Mibi-ChrMibi12 34281246 34282678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1808 3 330 WRKY Transcription Factor Family AT2G24570 43.695 1.20e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi12g1808 WRKY 7.4e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1808 12 34281246 34282678 Mibi12g1808 12 34281246 34282678 ECH