Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1803 ATGGCTCTCAGGGAAGATGCCCAGGATTTGCAGGATTCTTCATTGTTCCTCGATGCTCTTCTGTGTGAGGAAGATAGCTTCGACCAAGATTCTGCTGATGGGGATGAGGTTCATGATGATTCTGATTCGACCGTTGGAGATCCCTCATCTTTGCCCTTCATTTTGTCGGAAAATGACTTGTTCTGGGAAGATTCTGAGCTTGTCTCCCTTATCTCTAAGGAGGGAGAAACTCATTTGAATTCAGATAATCTGATTTCCGATGAGTCCCTGCAGAAAGCTCGCGAGGAGGCTGTGAGATGGATTTCTAAAGCTTGTGCTCACTATGGTTTCTCTGCTTTGACCACTGTTCTTTCTGTGAACTACTTCGATAGGTTCATTACTAGCCTCACGTTTCAGAAGGATAAGCCATGGATGACTCAGCTAGCTGCCGTTTCCTGTTTGGCTCTGGCTGCTAAAGTGGAAGAGATCCAAGTCCCTCTTCTTCTGGACCTGCAAGTGGAGCAATCTAAATACTTGTTTGAAGCAAAGACAATACAGAGAATGGAGCTTGTAGTGTTATCTTCTCTTAACTGGAGGATGAACCCAGTGACTCCAATCTCATTCTTTGAACTTATTGTGAGAATGCTGGGTCTAAAGAGTCGTTTGCACTGGGAGTTCTTGTTTCGGTGCGAGCGTGTGCTTCTTGATCTCATTCTGGATTCAAGGTTTATGAGATATCTTCCATCTACATTAGCTGTTGCTGTAATGATCCACGTTATTAGTGACGTTGAACCATTAAATGCAATGGAGTACAGAAATCAGCTTATGGTTTTGCTCAAAATCAATGAGGAACAAGTGAATGAATGTTACAAACTTATTCTGAAACTATTATGCTGTCAGGAAGGCAATCAAAATATGAAGCAGAAACGCAAGCGCCCTTCTAGCCCAGATGGTGTCATTGATGTTTCTTTTAGCGGTGATTACTCAAATGACTCGTGGGGCAAAACATCATCACTCTCATTGTCACTAGAGCCAATGTTTAAGCGAAGCAGAGCCCTAGAGCAGCAGATGCAACTGCCTTCTATGAATCGTGTAACAATTGATGTTCTTCACAGCCCTCGTTAG 1104 0.433 MALREDAQDLQDSSLFLDALLCEEDSFDQDSADGDEVHDDSDSTVGDPSSLPFILSENDLFWEDSELVSLISKEGETHLNSDNLISDESLQKAREEAVRWISKACAHYGFSALTTVLSVNYFDRFITSLTFQKDKPWMTQLAAVSCLALAAKVEEIQVPLLLDLQVEQSKYLFEAKTIQRMELVVLSSLNWRMNPVTPISFFELIVRMLGLKSRLHWEFLFRCERVLLDLILDSRFMRYLPSTLAVAVMIHVISDVEPLNAMEYRNQLMVLLKINEEQVNECYKLILKLLCCQEGNQNMKQKRKRPSSPDGVIDVSFSGDYSNDSWGKTSSLSLSLEPMFKRSRALEQQMQLPSMNRVTIDVLHSPR 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1803 367 SMART cyclin_7 99 187 IPR013763 -
Mibi12g1803 367 PANTHER CYCLINS 70 296 IPR039361 -
Mibi12g1803 367 FunFam CYCLIN D32 195 284 - -
Mibi12g1803 367 Gene3D - 72 284 - -
Mibi12g1803 367 SUPERFAMILY Cyclin-like 62 194 IPR036915 -
Mibi12g1803 367 FunFam D6-type cyclin 78 194 - -
Mibi12g1803 367 Pfam Cyclin, C-terminal domain 196 310 IPR004367 -
Mibi12g1803 367 MobiDBLite consensus disorder prediction 28 48 - -
Mibi12g1803 367 SUPERFAMILY Cyclin-like 178 310 IPR036915 -
Mibi12g1803 367 CDD CYCLIN 94 186 IPR013763 -
Mibi12g1803 367 Pfam Cyclin, N-terminal domain 72 194 IPR006671 -
Mibi12g1803 367 Gene3D - 80 194 - -
Mibi12g1803 367 SMART Cyclin_C_2 196 321 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1803 Mibi-ChrMibi12 34238374 34239809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1803 1 357 Core Cell Cycle Gene Families AT5G67260 48.098 1.86e-106 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0189 10 3139486 3140807 Mibi12g1803 12 34238374 34239809 CCT
Mibi12g1803 12 34238374 34239809 Mibi10g0189 10 3139486 3140807 ECH
Mibi08g1696 08 33661050 33662425 Mibi12g1803 12 34238374 34239809 ECH
Mibi12g1803 12 34238374 34239809 Mibi12g1803 12 34238374 34239809 ECH