Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1797 ATGAATACGGTTGGTGTTAGGAAGGATATGGATCGGATTAAGGGGCCATGGAGTCCTGAAGAGGACGAGGCGTTACAGCAGCTAGTTGAGAAGCATGGCCCTAGGAATTGGTCCTTGATCAGTAAATCCATTCCAGGTCGATCTGGCAAATCTTGCAGGCTTCGCTGGTGTAACCAGCTCTCACCTCAGGTCGAACACAGGGCATTCACTCCTGAAGAAGACGACACCATAATCAGAGCTCACGCTCGCTTCGGTAATAAATGGGCCACCATCGCCCGCCTACTCTCCGGCCGTACAGATAACGCCATCAAAAACCACTGGAACTCTACCTTGAAGCGCAAGTGTGCTTCCATGATGATCGATGATAACGGCGCCGTCGGTGGATTTGACGGCAGTTTTAGCCCTCAACCGCTTAAACGGTCTGTTAGCGCCGGCGCCGCCGTGCCGGTATCCACTGGTTTGTGCATGAATCCGCCGTCGCCGGGAAGTCCGTCTGGATCGGATGTGAGCGATCAGTCAAGCTTTCCGGTTGCGTCTTCTTCTCAGGTGTATCGGCCTGTTCCGAGGGCCGGTGGTGTTCTACCTCCTCAGGTAGAAACTACGTCGTCTTCCGATGACCCTCCGACGTCGTTATCGTTGTCTCTTCCCGGCGTAGACTCTTTCGAAGTCTCCAATCGGCCTGTGGACCCCACACTTGCTGCGCCGCCGGAGAATAGTTCGCTGTTGCTATCGGTAATGGCGCCGACGGCGGTTCCGGCGACTGCTCCGGTGGCGGTGGCACAGAAGGTTCGTTTGGGGAGGGATGAATATGATGGAGGAGGTGGTGAGCATCAGAATGGGTTTTTGGCTTTCAATTTCAGTGGTGAGTTGCTGGCTGTGATGCAAGACATGATACGGAAGGAGGTGAGGAGTTATATGGCGGGATTGGAGCAGCAGAATAATGGGGTGTGTTTTCAGGCAGCTGATGGATTTCGAAACGCTTCTGTGAAACGTATTGGAATTAGCAGGATCGATTCGTGA 1020 0.5373 MNTVGVRKDMDRIKGPWSPEEDEALQQLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIDDNGAVGGFDGSFSPQPLKRSVSAGAAVPVSTGLCMNPPSPGSPSGSDVSDQSSFPVASSSQVYRPVPRAGGVLPPQVETTSSSDDPPTSLSLSLPGVDSFEVSNRPVDPTLAAPPENSSLLLSVMAPTAVPATAPVAVAQKVRLGRDEYDGGGGEHQNGFLAFNFSGELLAVMQDMIRKEVRSYMAGLEQQNNGVCFQAADGFRNASVKRIGISRIDS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1797 339 FunFam MYB transcription factor 14 65 - -
Mibi12g1797 339 SMART sant 65 113 IPR001005 -
Mibi12g1797 339 SMART sant 13 62 IPR001005 -
Mibi12g1797 339 Gene3D - 13 65 - -
Mibi12g1797 339 CDD SANT 68 111 IPR001005 -
Mibi12g1797 339 PANTHER MYB PROTEIN-RELATED 14 188 - -
Mibi12g1797 339 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Mibi12g1797 339 Gene3D - 67 124 - -
Mibi12g1797 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Mibi12g1797 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Mibi12g1797 339 Pfam Myb-like DNA-binding domain 17 74 - -
Mibi12g1797 339 MobiDBLite consensus disorder prediction 196 218 - -
Mibi12g1797 339 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mibi12g1797 339 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Mibi12g1797 339 MobiDBLite consensus disorder prediction 153 218 - -
Mibi12g1797 339 MobiDBLite consensus disorder prediction 156 181 - -
Mibi12g1797 339 CDD SANT 16 58 IPR001005 -
Mibi12g1797 339 FunFam Transcription factor MYB44 68 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1797 Mibi-ChrMibi12 34197815 34198834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1797 6 338 MYB Transcription Factor Family AT4G37260 52.571 1.30e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi12g1797 Myb_DNA-bind_6 9.1e-18 CL0123