Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1784 ATGCCTCCACAAGATAACGAGCACGAACAGCCACTATTAGTGGACTCTAATTTTGACAAACAATCAACCGAAGCTGCTTACGATTCCTCGGAGAAAGTAGTGGTCGTCGGAATAGACGAGTCCAAAACTGATTACGACGATTGTGATCATGCACCGCCGTTTTCATGGAAGAAGCTATGGCTCTTCACTGGCCCTGGTTTTCTTATGAGCATTGCCTTTCTCGATCCTGGAAATCTTGAGGGAGATCTTCAGGCTGGTGCTGTTGCTGGCTACTCCCTCTTATGGCTTCTCATGTGGGCCACAGCTATGGGGCTTGTGGTTCAGCTTTTGGCGGCTCGGCTTGGAGTGGTGACTGGGAAGCATCTTGCTGAGCTGTGCAGGGAGGAGTATCCAACTTGGGCGCGAATGGTACTTTGGGTTATGGCGGAATTGGCTCTGATTGGGTCTGATATTCAAGAAGTTATTGGGAGTGCTATTGCTATCAGAATTCTGAGTAATGGGATTGTGCCTCTTTGGGCTGGGGTCATTATCACAGCTCTTGATTGTTTTATTTTCCTATTTCTTGAGAACTACGGTGTGAGGAAGTTGGAAGCATTTTTTGCTGTTCTTATTGGTGTAATGGCCATCGCATTTGCTTGGATGTTTGGTGAAACAAAGCCTAGCGGCAAAGATCTTCTTATTGGTATTTTGGTTCCGAAACTTAGCTCCAGGACAATACAGAAGGCTGTTGGAGTTGTGGGCTGCATTATTATGCCTCACAATGTATTCTTGCACTCTGCACTTGTTCAGTCAAGACAGGTTGAGCAGACCAAGAAAGGCAGAGTTCAGGAAGCACTTAATTACTATTCTATAGAGTCGACCGCTGCCCTTTTTATCTCCTTCATCATTAATGTATTTGTCACGACAGTTTTTGCGAAGAGTTTTTATGGTACTGACCTAGCAAATAGTGTTGGTCTTGTGAATGCTGGGCAGTATCTTGAAGAAAAGTATGGAGGTGGACTTCTGCCAATCTTATATATATGGGGTATTGGGTTATTAGCAGCTGGTCAAAGTAGCACTATTACAGGGACCTACGCTGGACAGTTTATAATGGGGGGTTTTCTTAATTTAAGGTTGAAAAAATGGATGAGGTCATTAATCACACGAAGTTGTGCTATCATCCCAACCGTGATAGTGGCTCTTGTCTTTGAAACATCAGAGGACTCATTAGACATTCTAAATGAATGGCTTAATGTTCTCCAGTCAATTCAAATCCCATTTGCACTTATTCCCTTGCTTTTTTTGGTGTCCAAGGAGCACATAATGGGCGCTTTCAGAATTGGCCCTATCCTCAAGGCTATTGCATGGTTTGTGGCTGCTCTGGTGATAACGATCAACGGGTATCTCATGCTAGAATTCTTCAAATCTGAGGTCAACGGAGTAATGGTCGGTGTTGTTGTGTGCGCTTTTACAGCTGCATATGTCGCATTCATACTCTACCTTATTTCAAGGGCCATCACCTTTTCACCTGGGCAAAGTTCAACCCAATCAAAGATGATTACTAACTCACAGAATTAA 1557 0.4387 MPPQDNEHEQPLLVDSNFDKQSTEAAYDSSEKVVVVGIDESKTDYDDCDHAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLVVQLLAARLGVVTGKHLAELCREEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIRILSNGIVPLWAGVIITALDCFIFLFLENYGVRKLEAFFAVLIGVMAIAFAWMFGETKPSGKDLLIGILVPKLSSRTIQKAVGVVGCIIMPHNVFLHSALVQSRQVEQTKKGRVQEALNYYSIESTAALFISFIINVFVTTVFAKSFYGTDLANSVGLVNAGQYLEEKYGGGLLPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRSLITRSCAIIPTVIVALVFETSEDSLDILNEWLNVLQSIQIPFALIPLLFLVSKEHIMGAFRIGPILKAIAWFVAALVITINGYLMLEFFKSEVNGVMVGVVVCAFTAAYVAFILYLISRAITFSPGQSSTQSKMITNSQN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1784 518 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 57 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 Hamap Divalent metal cation transporter MntH [mntH]. 42 467 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 Pfam Natural resistance-associated macrophage protein 80 441 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 PRINTS Natural resistance-associated macrophage protein signature 242 265 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 PRINTS Natural resistance-associated macrophage protein signature 411 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 PRINTS Natural resistance-associated macrophage protein signature 377 394 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 PRINTS Natural resistance-associated macrophage protein signature 193 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 PRINTS Natural resistance-associated macrophage protein signature 138 164 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 PRINTS Natural resistance-associated macrophage protein signature 168 187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 PRINTS Natural resistance-associated macrophage protein signature 349 368 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi12g1784 518 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 41 501 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1784 Mibi-ChrMibi12 33977399 33980363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1784 7 503 Inorganic Solute Cotransporters AT2G23150 78.800 0.0 791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1784 12 33977399 33980363 Mibi10g0204 10 3446762 3449678 CCT
Mibi12g1784 12 33977399 33980363 Mibi12g1784 12 33977399 33980363 ECH