Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1774 ATGATCACTGCCACCACTACGCTTACTACGGTATACGCAAAATCTGCTCTTTCCACTAAATTTCCTTCGCTCAATATCGAAACTAAACGAAGAAATCTGGCTTCTCCCTTCGGAAATGATCGATCCGTCGGGGTGTATCTCCGGCGGTCAATTTCTCAAATATCATACATGTCACACTGTAATGGCTCAACGCGCCATCGCATGTTCTGGTGTCCAATTTGTAGAGCTAACGGCTTCAGTAGTAAATCGGAGTTAGCTGGTACTGATTTCCCGGCGGAAAATGCGTACGAGCTGTTAGGAGTGTCACAGACCAGTTCGTTTGCTGAGATTAAAGCGTCTTTTCGCAAATTGGCCAAGGAAACTCACCCTGACCTTGCTGACTCAGATAACGATTCATCTGCGTCGCGACGATTTGTGCAAATCCTGGCCGCCTACGAGATTCTTTCAGATTCCAAAAAGAGAGCTCATTATGACATATACCTGTTGTCTCAAAAAAAGCTTGTGGAGAAGCATACTAGGCAGGGTTCAAAATTACACTTTTATAGATCACATGAAACAACTTCCAAGGAGATGGAAGTTGTTGAATGGTTAAAGTGGTACAGATCAGCTATAAACGATATTTTGTCAGAGAAGAGGGTAGTAGTTGGAACAGGCTATTTTGACGTACTTGAGGCAGACTTTTACTCAGCCATACACGCTGCTTACTTTGGCCCTGACATCGAATCAATGGAGCTTCTCCCCGAGTGCTTTGAGGCTGAGGAAAGGTCCTCTTGTGAAACACCGGAGGTTTTGCACATAGTTTCGGGTCGTGATCTTTTTGGGATGGTTTGCTTAGCCAATAAGAACCCAGAAATATCATCTACCTATAACGAAAAGTTAACTTCGTTCAGATCCTTCCAACCAGGTCCATGTCAATCAATAAAGAATGCAAATATTCACACAAATGCAGAGGTTCCACTTGGATTTGGATTTCCACGAATTCATGACTCTAAAATCTCAAGTCATCTATCAGATGCATATAGAGATCTAGAATTGCATGTATCTGGAAGTGTGATTGCTGTGGCCTCCAGGGTCCCTCCTGGAAGCTATTCTGATCCTGAAGTAGCAGAGGATCGCATTCATGTTTATCTTAATTCAGATGAATACTCCAAGCATCCCAAAAACTGTGATTCTAAAAATTACCCCTCAAGTAATTCAGCTGTCACACGGATTCACATAGGAACCATAGCTGGCCTTGGGACCAATCCAGACGAGAGTTCCTGTAATGTCTATGACAGTAGGGGCGCCAAGACCCATGTGATTATGAAACACAGGACCTTGCTGGTGAAGCACATGCACTGGTATCAAGTAGGAGAAAAGGTCTCTATTTGTGAGTGTAGATGCACGAGAGCCAAATTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGTTTGCATGACATAGGGGGTTGGTATGTCGAAACATATGGCAAAAATAAGAAAGGTCTAACAATCCCATCTCAAAGGTTATGGGATGGCTGGGATGACAGTCAGCATTTTGAGAGAAGACTTCATCCGGCAATGTATCTACTTGGTCTTGCATATAGGACACTTGATCTTGAATATGCCAAAATAAGAAAACAAACATTTAGGAAAGCTGTGGTAGGGCAACTGTCTAGAATCCTTCATTGGTGCAAAAGACTTGGTTAA 1695 0.4307 MITATTTLTTVYAKSALSTKFPSLNIETKRRNLASPFGNDRSVGVYLRRSISQISYMSHCNGSTRHRMFWCPICRANGFSSKSELAGTDFPAENAYELLGVSQTSSFAEIKASFRKLAKETHPDLADSDNDSSASRRFVQILAAYEILSDSKKRAHYDIYLLSQKKLVEKHTRQGSKLHFYRSHETTSKEMEVVEWLKWYRSAINDILSEKRVVVGTGYFDVLEADFYSAIHAAYFGPDIESMELLPECFEAEERSSCETPEVLHIVSGRDLFGMVCLANKNPEISSTYNEKLTSFRSFQPGPCQSIKNANIHTNAEVPLGFGFPRIHDSKISSHLSDAYRDLELHVSGSVIAVASRVPPGSYSDPEVAEDRIHVYLNSDEYSKHPKNCDSKNYPSSNSAVTRIHIGTIAGLGTNPDESSCNVYDSRGAKTHVIMKHRTLLVKHMHWYQVGEKVSICECRCTRAKLPPSKFWLFEPRCGLHDIGGWYVETYGKNKKGLTIPSQRLWDGWDDSQHFERRLHPAMYLLGLAYRTLDLEYAKIRKQTFRKAVVGQLSRILHWCKRLG 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1774 564 Gene3D DnaJ domain 85 182 IPR036869 -
Mibi12g1774 564 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 58 563 - -
Mibi12g1774 564 CDD DnaJ 94 150 IPR001623 -
Mibi12g1774 564 Pfam DnaJ domain 94 158 IPR001623 -
Mibi12g1774 564 PRINTS DnaJ domain signature 96 114 IPR001623 -
Mibi12g1774 564 PRINTS DnaJ domain signature 114 129 IPR001623 -
Mibi12g1774 564 PRINTS DnaJ domain signature 133 153 IPR001623 -
Mibi12g1774 564 ProSitePatterns Nt-dnaJ domain signature. 138 157 IPR018253 -
Mibi12g1774 564 ProSiteProfiles dnaJ domain profile. 94 161 IPR001623 -
Mibi12g1774 564 SMART dnaj_3 93 153 IPR001623 -
Mibi12g1774 564 SUPERFAMILY Chaperone J-domain 93 163 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1774 Mibi-ChrMibi12 33899922 33907556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1774 96 158 C2H2 Transcription Factor Family AT1G74250 45.455 4.83e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1774 12 33899922 33907556 Mibi12g1774 12 33899922 33907556 ECH