Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1760 ATGAGTTGCAACGGTTGCCGAGTTCTTCGAAAAGGTTGCAGCGAGTCTTGTATTCTGAGGCCTTGCTTGCAGTGGATTGATACTCCCGAAGCCCAAGGACATGCCACTGTTTTCGTAGCCAAGTTCTTTGGCCGTGCTGGTCTCATGTCCTTCATTTCCAACGTCCCTCAAAATCAACGACCTGCTCTGTTTCAGTCCTTGTTGTTTGAAGCGTGTGGACGAACGGTGAATCCGGTGAACGGAGCGGTTGGGCTTCTGTGGACCGGAAACTGGCACGTGTGTCAGGCCGCCGTTGAGACCGTGCTTCGTGGCGGCACTTTAAGGCCGATTTCTGAGCTTCTTAGCTTGGATGCTTCTGCCATGGCTGCCGATGAGGCGTCTGAGGCGGAAGTCGCGTGTACGGACAACATGTGGAGCGTGAGAGATCCGAATCTGAGTTCGCGATTCACGAATTCTCGATCTAACAAGTTCTCTTCCTGCAAACGCAAGCGATCGGATGAATCTAACCTGCCTCAGAAGGCCGATCTTGATCTCCGGTTGATGCCGAGTTTCCTGCAGAAAGTTTCAGGGTATAATTGCAGGCCGGAAATCGGCCGGCCTGGTACGCCGTCGATGAATTCGGAAGAATCTGTGACGACGACGGTGTGCTTGGAAAGTGGAGGTGGAGTTCACGGCGTAGAGCCCAAACTTCTCAACTTTTTCGCTTGA 708 0.5282 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRAGLMSFISNVPQNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPISELLSLDASAMAADEASEAEVACTDNMWSVRDPNLSSRFTNSRSNKFSSCKRKRSDESNLPQKADLDLRLMPSFLQKVSGYNCRPEIGRPGTPSMNSEESVTTTVCLESGGGVHGVEPKLLNFFA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1760 235 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Mibi12g1760 235 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Mibi12g1760 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1760 Mibi-ChrMibi12 33794632 33795439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1760 1 235 AS2 family AT4G37540 56.439 3.44e-82 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi12g1760 LOB 3.6e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0231 10 3890558 3891463 Mibi12g1760 12 33794632 33795439 CCT
Mibi12g1760 12 33794632 33795439 Mibi10g0231 10 3890558 3891463 ECH
Mibi12g1760 12 33794632 33795439 Mibi12g1760 12 33794632 33795439 ECH