Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1750 ATGGCTGATACCAAGAAATTTATTCCTCTTCCACCTCCTTATCCTCATCCAGCAGTAAACCGTTGTTATTGTAAGGATATAGTTACTAAAAATTCGCCACCAAGAGGACGTATTTGTGTTTCTGTAGCAACAAGAGATCTGTGGGAGCGGCTTTTTGATGAAGGTTATAAAGCAGATGTTTTCATTAATACTGATAATGGTGGCATTATTTACGCGCATTCATATATTCTTGCCATGGCTTCTCCAGTATTGGGAGGCATGATTAAGCAAGCAAGCCGTTATCATCATATGAAATCAATCTTGATTTCTGGGGTTCCACATGGCGCTGTTCGAGTTTTCATTCGGTTTTTGTATAGTTCCTGTTACGAGGAAGAAGAAATGAATGAATTCGCGTTACATTTGTTGGTGCTGTCTCATGTATTTGTGATTCCCCACTTGAAGCGTGAATGTGAACAGAAGCTAGAATCGGATTTCCTTACAATCGACAATATAGTTGATGTGTTTCAACTTGCATTGTTGTGTGATGCTCCTCGCCTTAGCCTCATTTGTCACCGTCACATCCTTAAAAATTTTAAAGTAGTTTCAGAGTCTGAAGGGTGGAAGGCTATGAAAGAGAGCCATCCATCTCTCGAGAAGGAACTTCTCGAGTCTCTCATTGAGGAAGAAAATATCACAAAGGAGAGGATCAGAAAAATTAATGAGAAGAAAATATATCTTCAACTGTACGAGGCAATGGAAGCGCTGGTTCACATATATAGAGATGGGTGTCGAACCATAGGCCCACACGATAAAGACTTCAAAGAAAACCAAGCACCATGTAGTTTTGCAGCATGCAAAAGCTTAGAATTGCTTGTCCGTCATTTTGCTGGGTGCAAGTTGAGAGTCCCTGGTGGTTGCAATCATTGCAAGAGGATGTGGCAGCTTTTGGAACTGCACTCTCGAATATGTGCCAATCCAGATACCTGTAGAGTTCCCTTATGCAGGAACTTTAAGGAAAGAATATCAACACAAAACAAGAAAGATGAAGTTAGGTGGAGAATACTGGTAGAAAAGATCTTGAGAACTAAAGGCATTGCGGTAGCACCATTCTTTCAAAATGCAATGACCGCAAGTTTTGTTGAAGCAAGGTCGCAGTTGGTATAG 1143 0.4068 MADTKKFIPLPPPYPHPAVNRCYCKDIVTKNSPPRGRICVSVATRDLWERLFDEGYKADVFINTDNGGIIYAHSYILAMASPVLGGMIKQASRYHHMKSILISGVPHGAVRVFIRFLYSSCYEEEEMNEFALHLLVLSHVFVIPHLKRECEQKLESDFLTIDNIVDVFQLALLCDAPRLSLICHRHILKNFKVVSESEGWKAMKESHPSLEKELLESLIEEENITKERIRKINEKKIYLQLYEAMEALVHIYRDGCRTIGPHDKDFKENQAPCSFAACKSLELLVRHFAGCKLRVPGGCNHCKRMWQLLELHSRICANPDTCRVPLCRNFKERISTQNKKDEVRWRILVEKILRTKGIAVAPFFQNAMTASFVEARSQLV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1750 380 FunFam BTB/POZ and TAZ domain-containing protein 2 160 230 - -
Mibi12g1750 380 SMART TAZ_2 235 328 IPR000197 -
Mibi12g1750 380 Pfam TAZ zinc finger 242 327 IPR000197 -
Mibi12g1750 380 Coils Coil 215 235 - -
Mibi12g1750 380 SMART BTB_4 58 158 IPR000210 GO:0005515
Mibi12g1750 380 ProSiteProfiles Zinc finger TAZ-type profile. 232 330 IPR000197 -
Mibi12g1750 380 Pfam BTB/POZ domain 50 155 IPR000210 GO:0005515
Mibi12g1750 380 Gene3D TAZ domain 235 355 IPR035898 -
Mibi12g1750 380 CDD BACK 160 203 - -
Mibi12g1750 380 FunFam BTB/POZ and TAZ domain-containing protein 2 232 357 - -
Mibi12g1750 380 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 34 363 IPR044513 -
Mibi12g1750 380 SUPERFAMILY POZ domain 45 156 IPR011333 -
Mibi12g1750 380 SUPERFAMILY TAZ domain 235 335 IPR035898 -
Mibi12g1750 380 Gene3D Potassium Channel Kv1.1; Chain A 41 158 IPR011333 -
Mibi12g1750 380 Gene3D - 159 234 - -
Mibi12g1750 380 ProSiteProfiles BTB domain profile. 58 126 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1750 Mibi-ChrMibi12 33677842 33679999 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mibi12g1750 BTB 2.4e-12 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1750 12 33677842 33679999 Mibi12g1750 12 33677842 33679999 ECH