Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1748 ATGGTTAATTTATTAGATGAACGCTTCACTAGAGTTCGATCTAAGAACTCGTCAAGAGAAGCTCTTGCAAATTGGAGGAATCTCTGTGGTATAGTGAAGAACCCTAAACGACGCTTTCGTTTCACCGCAAATCTCTCCAAGCGAGATGAAGCGGATGCTATGCGTCGTATCAATCAGGAGAAGCTGAGAGTTGCTGTTTTAGTTTCCAAAGCAGCACTTCAATTTATTCAAGGTGTGCCACAAGGTGATTATGTTGTACCCGAGGATGTTAAAGCAGAAGGTTTTCAGATCTGCGCTGAAGAATTAGGGTCTATTGTTGAAGGTCATGATATAAAAAAGCTTAAATATCATGGCGGGGTTAATGGTCTTGCAGGCAAGCTTTCAGCATCAATCACTGATGGGCTTAGTAAGGACACTGATCTTATTAACAAGAGACAAAAGATATATGGAATCAACAAATTTACTGAGAGTGAGACTCGGAGTTTCTGGGTTTTTGTTTGGGAAGCCCTTCAAGACATGACTCTCATGATCCTTGGAGTATGTGCTCTTGTGTCTCTCATAGTTGGTATAGCAATGGAAGGATGGCCCCATGGGGCCCATGATGGGCTTGGAATTGTTGCAAGTATATTACTGGTTGTCTTTGTGACAGCAACAAGTGATTACCGCCAATCATTACAATTCAAGGACCTGGACAAGGAGAAGAAGAAGATCACCATTCAGGTCACAAGAAATGGTTATAGGCAGAAAATGTCAATATATGATTTGCTTCCCGGTGACATTGTGCATCTTGCTATAGGAGATCAAGTCCCAGCAGATGGCCTATTTCTTTCAGGATTTTCTGTGATGATCGATGAGTCAAGTTTGACCGGGGAGAGCGAGCCAGTGATGGTGAGTTCTGAAAATCCGTTTCTTCTTTCAGGTACTAAGGTCAAAGATGGCTCTTGCAAAATGATGATTACCACAGTTGGGATGAGGACTCAATGGGGTAAGTTGATGGCAACTCTCAGTGAAGGAGGAGATGATGAAACCCCATTGCAGGTGAAGTTAAATGGAGTGGCAACCATTATTGGGAAGATAGGCCTGTTCTTTGCTGTAGTTACTTTTGCAGTTTTAGTGCAAGGCCTTTTGACCCGTAAGTTCCAAGAAGGAAGCCTCTTGAACTGGTCTGGAGATGAGGCATTGCAAACTTTGGAGTTCTTTGCTGTTGCTGTTACAATCGTTGTTGTTGCTGTTCCAGAGGGGCTGCCATTAGCTGTCACATTGAGCCTTGCTTTTGCTATGAAAAAGATGATGAACGACAAAGCCCTTGTCCGAAACTTAGCAGCTTGTGAAACCATGGGATCAGCCACAACAATATGCAGTGACAAGACTGGAACATTAACTACCAACCGCATGACAGTTGTGAAAACATGCATTTACATGACTAGGAAAGAAGTGAGTAATGATGCTTCTTCTACCTTGCCTTCTGATCTCCCTGATTCTGCTGTGAAACTGCTGCTGCAGTCAATATTTCTTAGCACTGGTGGAGAAGTTGTGGTCAATGAGAATGGAAAACGTGAGGTGTTGGGGACACCAACAGATACTGCAATATTGGAGTATGGATTATCTCTAGGTGGGGACTTTCAGGCAGAGAGAAATGCATGTAAGCTTGTTAAAGTTGAGCCATTTAACTCTGTAAAGAAAAGGATGGGTGTAGTTGTGGAGCTTTCTGAGGGAGGCTTGAGAGCCCACACTAAAGGAGCTTCTGAAATAATTCTGGCTGCATGTGACAAGGTTATCAATTCCAAAGGTGAGGTTGTTCCACTTGATGAAGAATCTAGGAAACATCTTACGGTGACAATAAACCAATTTGCAAGTGAGGCACTTAGAACTCTATGCATTGCCTACATGGATGTGGAAAAGGGATTCTTACCTGAAGACCCCATTCCAGTTTCTGGGTATACTTGTATTGGGATTGTTGGTATTAAGGATCCTGTTCGTCCTGGTGTTAAAGAATCAGTTGCAGTTTGCCGTTCAGCTGGTATAACAGTGAGAATGGTTACAGGCGACAATATTGATACTGCAAAGGCTATAGCTAGAGAATGTGGGATTTTAACAGATGATGGTATAGCCATTGAAGGTCCAGAATTTAGAGAGAAGAGTCCAGAGGAATTGTTCAAACTGATCCCAAAAATTCAGGTTATGGCTCGCTCGTCACCTATGGACAAGCATACATTGGTGAAACACCTCCGTACCACATTTGGGGAAGTTGTAGCCGTGACTGGTGATGGAACAAATGATGCCCCAGCTCTTCATGAAGCTGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATCATTCTGGATGATAACTTTTCCACAATTGTGACTGTGGCAAAATGGGGACGTTCAGTTTACATAAACATTCAGAAATTTGTCCAGTTCCAGTTGACTGTTAATGTGGTTGCATTACTGGTGAACTTCACTTCAGCTTGCTGGACAGGAACTGCACCCCTTACAGCTGTACAACTACTGTGGGTGAACATGATAATGGACACACTGGGAGCACTGGCACTTGCAACTGAACCTCCAAACGATGAATTGATGAAGCGGTCACCTGTAGGAAGGACGGGTAATTTCATTAGCAACGCCATGTGGAGGAACATCCTAGGCCAATCATTGTATCAGATTATGGTGATATGGTTTCTTCAGACCAGTGGAAAATTGTATTTTAACCTCAGTGGCCCTGATGCCGATCTGATCCTAAACACACTAATTTTCAACGCATTCGTCTTCTGTCAGGTTTTTAATGAAATTAGCTCACGTGAGATGGAGAAGATAAATGTTTTCAAAGGCATATTAAATAATTATGTGTTCGTAGGCGTCATCAGTGCAACTGTTATCTTTCAAATCATAATCGTCGAGTTCTTGGGAACCTTTGCAAACACCACACCTCTCACTCTGCAACAATGGGTTTCAAGCATATTTGTAGGGCTTTTGGGCATGCCAATTGCAGCTGTAATAAAGATGCTCTCTGTCTGA 3048 0.4281 MVNLLDERFTRVRSKNSSREALANWRNLCGIVKNPKRRFRFTANLSKRDEADAMRRINQEKLRVAVLVSKAALQFIQGVPQGDYVVPEDVKAEGFQICAEELGSIVEGHDIKKLKYHGGVNGLAGKLSASITDGLSKDTDLINKRQKIYGINKFTESETRSFWVFVWEALQDMTLMILGVCALVSLIVGIAMEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKITIQVTRNGYRQKMSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVMIDESSLTGESEPVMVSSENPFLLSGTKVKDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLLTRKFQEGSLLNWSGDEALQTLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNRMTVVKTCIYMTRKEVSNDASSTLPSDLPDSAVKLLLQSIFLSTGGEVVVNENGKREVLGTPTDTAILEYGLSLGGDFQAERNACKLVKVEPFNSVKKRMGVVVELSEGGLRAHTKGASEIILAACDKVINSKGEVVPLDEESRKHLTVTINQFASEALRTLCIAYMDVEKGFLPEDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNIDTAKAIARECGILTDDGIAIEGPEFREKSPEELFKLIPKIQVMARSSPMDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACWTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRTGNFISNAMWRNILGQSLYQIMVIWFLQTSGKLYFNLSGPDADLILNTLIFNAFVFCQVFNEISSREMEKINVFKGILNNYVFVGVISATVIFQIIIVEFLGTFANTTPLTLQQWVSSIFVGLLGMPIAAVIKMLSV 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1748 1015 SUPERFAMILY HAD-like 451 859 IPR036412 -
Mibi12g1748 1015 PANTHER CATION TRANSPORTING ATPASE 77 1014 - -
Mibi12g1748 1015 FunFam Calcium-transporting ATPase 17 77 - -
Mibi12g1748 1015 Gene3D - 168 1012 - -
Mibi12g1748 1015 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Mibi12g1748 1015 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Mibi12g1748 1015 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Mibi12g1748 1015 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Mibi12g1748 1015 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Mibi12g1748 1015 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Mibi12g1748 1015 SFLD p-type atpase 435 806 IPR044492 -
Mibi12g1748 1015 CDD P-type_ATPase_Ca_PMCA-like 142 887 - -
Mibi12g1748 1015 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi12g1748 1015 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi12g1748 1015 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi12g1748 1015 Pfam Cation transport ATPase (P-type) 514 592 - -
Mibi12g1748 1015 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Mibi12g1748 1015 FunFam Calcium-transporting ATPase 216 336 - -
Mibi12g1748 1015 Gene3D - 17 77 - -
Mibi12g1748 1015 Gene3D - 450 799 IPR023214 -
Mibi12g1748 1015 FunFam Calcium-transporting ATPase 647 799 - -
Mibi12g1748 1015 Gene3D - 463 658 IPR023299 GO:0000166
Mibi12g1748 1015 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Mibi12g1748 1015 FunFam Calcium-transporting ATPase 771 1015 - -
Mibi12g1748 1015 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 109 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi12g1748 1015 Pfam haloacid dehalogenase-like hydrolase 651 768 - -
Mibi12g1748 1015 Gene3D - 140 336 - -
Mibi12g1748 1015 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 663 IPR023299 GO:0000166
Mibi12g1748 1015 SUPERFAMILY Calcium ATPase, transduction domain A 238 333 IPR008250 -
Mibi12g1748 1015 Pfam Cation transporting ATPase, C-terminus 839 1013 IPR006068 -
Mibi12g1748 1015 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 724 835 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi12g1748 1015 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 392 484 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi12g1748 1015 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 205 376 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi12g1748 1015 Pfam Cation transporter/ATPase, N-terminus 116 185 IPR004014 -
Mibi12g1748 1015 Pfam E1-E2 ATPase 236 431 - -
Mibi12g1748 1015 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1013 IPR023298 -
Mibi12g1748 1015 FunFam Calcium-transporting ATPase 463 658 - -
Mibi12g1748 1015 SFLD C1.7: P-type atpase like 435 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1748 Mibi-ChrMibi12 33649402 33654750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1748 1 1015 Primary Pumps ATPases AT4G37640 81.890 0.0 1693
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1748 12 33649402 33654750 Mibi12g1748 12 33649402 33654750 ECH