Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1736 ATGGGGAAGAAGCAGCACAGCAAGGATCGGATGTTTATCACTAAAACAGAGTGGGCAACGGAATGGGGAGGAGCCAAATCTAAAGAAAATCGTACCCCTTTCAAAAGACTTCCTTTTTATTGCTGCGCGCTTACATTTACGCCGTTTGAGTATCCGGTGTGCACAGCTGATGGGAGCGTTTTTGATGTTATGTGGCTGTGGTTTTTGCAATTTGGCTGTAGGAATATAACACCTTATATTATCAAATATGGAAAGCATCCCGTCACTGGAGCTCCTCTTAAGCAGGACGACCTCATTCCACTAACTTTCCACAAGAATTCTGATGGGGAATTTCAGTGCCCTGTGCTAAACAAAGTTTTCACTGAATTCACGCATATTGTGGCTGTAAAGACCACTGGAAATGTTTTCTGCTATGAGGCCATTAAAGAATTAAACATCAAGACAAAAAACTGGAAGGAGCTCCTGAATGACGAGCCATTCACTAAGGATGACCTCATAACTATCCAGGCAAGTAATCCCAATGCTCTTGACAGCAGGGTTCTTCTGGATTTTGATCATGTTAAAAATAATTTGAAAGTTGATGATGAAGGTTTGCAATACCTCGCAGCTCCATCTTTTGTTATCTATAATTCTGTCTTTTTTTATATTGGTGATATTGTTGATTCTGTTTCTGCTTGTATCAGCTATGATATCTTTGGTATATTTTTCTCAGAACTGAACAAAATGGGTTCAGATCCAACCTATAATATAAATGTGTCTGGAGATATCAAACAAATGCTTCAGGAGCTTGGAACTGAGAGAGCAAAGGAAACTGCGATGCATGGGGGAGGTGGGAGCAAGGCACAAAAAGAAAGGGCTGCTGCACTTACTGCCTTGTTGGCTGCAAGGTCACGTTTGAAGGAGGATTCCAAGTCAAATGGCGATGCCAAAGCTTCTCAGGGATTTAGTATAGTAGATGCTGCATCTGCTTCAGTGCATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAAGTGATAAAACTGCTGCTAGGATAGCTATGCACTTGGCCGGTGAGAGGGCTCCATTAAACGGGAAGCTGGTAAAAAGCCGATACACAACCGGCGCCGCTTCACGATCCTTTACTTCAACATCTTTTGATCCTGTTACACAAAATGAATATGAATATGTAAAAGTGGAGAAGAATCCTAAGAAGAAAGGATATGTACAATTGCATACTACTCATGGTGATTTGAACATTGAGCTGCACTGTGATATAGCACCCAGGGCATGTGAGAACTTCATCACACTTTGTGAGCGTGGATATTATAATGGTGTTGCATTTCATAGGAATATAAGGAATTTTATGATACAAGGAGGTGATCCTACTGGGACTGGAAGAGGAGGTGAATCAATATGGGGGGGACCATTTAAAGATGAAGTTAATTCCAAAGTACTTCATTCTGGTAGGGGTGTTGTTAGCATGGCAAATAGTGGTCCGCACACCAATGGCTCCCAGTTCTTCATCCTGTACAAATCTGCAAATCATTTAAATTATAAACACACAGTTTTTGGCGGAGTGGTTGGTGGCTTGACAACATTGGCTGTCATGGAGAAGGTTCCTGTTGATGACAATGACCGACCTCTGGAAGAAATCAAGATAACAGGTGTCACAGTTTTTGTTAATCCCTATACAGAACCAGATGAGGAAGACCAGCAGAAGGCTGATGAGAAAAATGTTGAGGATGAAGATAAGGATAAAGTTGGATCATGGTATAGTAATCCTGGTGCCGGAATATCTGAATCTGGAGGCGTGGGTGGTGGTGGTGGTGTTGGCAAGTACCTGAAAGCCAGGAATGCTCAAGATTCTACCACTGTTGACAATAGCACATCTGTTGTAGGAAAGAAAAGAAAAGTGGGAGGTGCCAGTGGTGAATTTAAAGACTTTTCAGGATGGTGA 1938 0.4216 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKRLPFYCCALTFTPFEYPVCTADGSVFDVMWLWFLQFGCRNITPYIIKYGKHPVTGAPLKQDDLIPLTFHKNSDGEFQCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLNDEPFTKDDLITIQASNPNALDSRVLLDFDHVKNNLKVDDEGLQYLAAPSFVIYNSVFFYIGDIVDSVSACISYDIFGIFFSELNKMGSDPTYNINVSGDIKQMLQELGTERAKETAMHGGGGSKAQKERAAALTALLAARSRLKEDSKSNGDAKASQGFSIVDAASASVHGRSAAAAKASSSDKTAARIAMHLAGERAPLNGKLVKSRYTTGAASRSFTSTSFDPVTQNEYEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRNIRNFMIQGGDPTGTGRGGESIWGGPFKDEVNSKVLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNYKHTVFGGVVGGLTTLAVMEKVPVDDNDRPLEEIKITGVTVFVNPYTEPDEEDQQKADEKNVEDEDKDKVGSWYSNPGAGISESGGVGGGGGVGKYLKARNAQDSTTVDNSTSVVGKKRKVGGASGEFKDFSGW 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1736 645 CDD cyclophilin_RING 401 559 - -
Mibi12g1736 645 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 382 566 - -
Mibi12g1736 645 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 106 IPR013083 -
Mibi12g1736 645 MobiDBLite consensus disorder prediction 611 625 - -
Mibi12g1736 645 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 484 499 IPR002130 GO:0000413|GO:0003755
Mibi12g1736 645 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 499 511 IPR002130 GO:0000413|GO:0003755
Mibi12g1736 645 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 512 527 IPR002130 GO:0000413|GO:0003755
Mibi12g1736 645 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 441 453 IPR002130 GO:0000413|GO:0003755
Mibi12g1736 645 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 415 430 IPR002130 GO:0000413|GO:0003755
Mibi12g1736 645 MobiDBLite consensus disorder prediction 560 582 - -
Mibi12g1736 645 ProSiteProfiles U-box domain profile. 35 118 IPR003613 GO:0004842|GO:0016567
Mibi12g1736 645 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 401 552 IPR002130 GO:0000413|GO:0003755
Mibi12g1736 645 SUPERFAMILY Cyclophilin-like 401 561 IPR029000 -
Mibi12g1736 645 CDD RING-Ubox_PPIL2 38 120 IPR026951 -
Mibi12g1736 645 SMART Ubox_2 39 111 IPR003613 GO:0004842|GO:0016567
Mibi12g1736 645 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 405 552 IPR002130 GO:0000413|GO:0003755
Mibi12g1736 645 Gene3D - 382 566 IPR029000 -
Mibi12g1736 645 MobiDBLite consensus disorder prediction 556 645 - -
Mibi12g1736 645 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 106 - -
Mibi12g1736 645 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 395 566 IPR044666 -
Mibi12g1736 645 SUPERFAMILY RING/U-box 37 114 - -
Mibi12g1736 645 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 436 453 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1736 Mibi-ChrMibi12 33536678 33544713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1736 1 645 U-box Gene Family AT5G67530 69.219 0.0 867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1736 12 33536678 33544713 Mibi12g1736 12 33536678 33544713 ECH