Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1710 ATGATTGAGTTGCCTAGCCTCAATAAACACCCAACTTGGCTAGAATATCTATCTATCTATTATCTAATAATAATAGGTGAACAAGTGAGACAGACAAAGATGAAGTCTTCGGAGAACGATGAAAATAACTGGTTGGGTTTCTCTCTCTCCCCCCACATGAATCTTGATGTCCCTTCTTCTTCTTCTGACTGTAACCACCAATACCAACAAGACACACAACTCACAACACGGCCTTCCTCTGCCGCCGCAGATACAGTTCCGGCAAGCTTTTATCACTCCATGCCCCTTCCTCCTAATTATGGCATTTACTATGGTGGCCTCGAAGCTGAAAATGTCGGCTTCTATTCTTCCCTTCCTGTCATGCCCCTAAAATCTGACGGCTCTCTCTATCTAATGCACTCACAACCTCAAGCAATGGTATCGAGTTCAGCTCCAAAACTTGAGAATTTCTTAGGCAGTTCAACAATGGGGACTTTGAGCTTAGACAGCATGATTTTCACCAACCAATCCTCACGCCGAGAACTCAACAACCCAAACTACCTTAACCGCGTCGAACATGGACAAGACATTCAGGCTCATCCTTTCGCACCGTACTATTCTGGCTTCAGAAGTAGTCATGAAATGATGTTAGAAGGGGCCAAGCAAAATGAGGTTTCAGAGTGTAATGCCCATGTCCCAAGTATTAGAGATGAGGGAGTTTCTGGAATGAAGAACTGGGGAATAAGAACCAACCCGACCGGTCATGGACCGGAGTCAGAAATGATGGTCAACGTGGAGGAGAACAATGGTGGTGAATCTGGATCCATTGGATCAATGGCTTATGGTGATTTGCATTCACTGAACTTATCCATGAGCTCTGGCTCACAGTCAAGCTGCGTCACAAGTTCACAGAGAGCTTCACCTTCTATCATCGATTCTGTTGGTGTGGTTGATACAAAGAAAAGAGGACCTGAAAAGTTTGACCAGAAGCAAATTATTCACCGGAAATCCATAGATACATTTGGCCAAAGAACCTCTCAATATAGAGGTGTAACAAGACATAGATGGACTGGTAGATACGAAGCTCATCTTTGGGACAACAGTTGCAAGAAAGAGGGTCAAAGCAGGAAAGGAAGGCAAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATCTGGCCGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCGTTGGAAAATTATCATAATGAACTTGAGGAAATGAAGAACATGACCAGGCAGGAATACGTAGCTCATTTGCGGAGGAAAAGCAGTGGATTTTCCAGAGGTGCTTCCATGTACAGAGGAGTAACAAGGCATCATCAACATGGGCGGTGGCAAGCTCGGATTGGTAGGGTGGCCGGAAACAAGGATCTATATCTTGGAACATTCAGTACCCAAGAGGAAGCAGCTGAGGCATATGACATTGCAGCCATAAAGTTCCGTGGAGTAAACGCAGTGACCAACTTTGATATTACACGATATGATGTGGAAAAAATCATGGCTAGCAGTAACCTTCTTAGTGGTGAACTGGCCAGGCGAAACAGAGAGATCGATGGTGGTATTACTGATCAAGCTATAATTCCTATAGGTACAGCTTATATTGAAAACCAGGATGCAATTTCAATGCGCAAGAGCTTTGAAGGCCAATCATCATCAGAGTGGAAGCTGGGAACGCATATCTTAAATCGTTCTCAATGGATGACAGAACTTGACCAAAATCCAGCAAGAATTGAGACTTATAGAACTCAGTCTTTTCCAGTGCCTTTGGATAACATGATCCATCAAGTAGATGAGTCAACCAAGATGGGAACACACATGTCAAATCCTTCGTCATTAGTAACAAGCTTGAGCAGCTCACGTGAAGTTAGTCCTGATAAATCAAGCTTGCCAATTCTTACTGAGACGCCTTCGTTAGTGGCAAGCTTGAGGCCTCCACTTTCATTGCCTCATGTTCCAGTTTTTGCTGCTTGGACAGATGCTTGA 2004 0.4416 MIELPSLNKHPTWLEYLSIYYLIIIGEQVRQTKMKSSENDENNWLGFSLSPHMNLDVPSSSSDCNHQYQQDTQLTTRPSSAAADTVPASFYHSMPLPPNYGIYYGGLEAENVGFYSSLPVMPLKSDGSLYLMHSQPQAMVSSSAPKLENFLGSSTMGTLSLDSMIFTNQSSRRELNNPNYLNRVEHGQDIQAHPFAPYYSGFRSSHEMMLEGAKQNEVSECNAHVPSIRDEGVSGMKNWGIRTNPTGHGPESEMMVNVEENNGGESGSIGSMAYGDLHSLNLSMSSGSQSSCVTSSQRASPSIIDSVGVVDTKKRGPEKFDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYHNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASSNLLSGELARRNREIDGGITDQAIIPIGTAYIENQDAISMRKSFEGQSSSEWKLGTHILNRSQWMTELDQNPARIETYRTQSFPVPLDNMIHQVDESTKMGTHMSNPSSLVTSLSSSREVSPDKSSLPILTETPSLVASLRPPLSLPHVPVFAAWTDA 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1710 667 FunFam AP2-like ethylene-responsive transcription factor ANT 339 405 - -
Mibi12g1710 667 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 139 522 - -
Mibi12g1710 667 FunFam AP2-like ethylene-responsive transcription factor 438 499 - -
Mibi12g1710 667 PRINTS Ethylene responsive element binding protein signature 479 499 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 PRINTS Ethylene responsive element binding protein signature 341 352 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 CDD AP2 438 499 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 ProSiteProfiles AP2/ERF domain profile. 439 497 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 SUPERFAMILY DNA-binding domain 438 498 IPR016177 GO:0003677
Mibi12g1710 667 SMART rav1_2 340 409 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 SMART rav1_2 439 503 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 CDD AP2 339 403 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 SUPERFAMILY DNA-binding domain 339 405 IPR016177 GO:0003677
Mibi12g1710 667 Pfam AP2 domain 340 395 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 Pfam AP2 domain 440 489 IPR001471 GO:0003700|GO:0006355
Mibi12g1710 667 MobiDBLite consensus disorder prediction 609 636 - -
Mibi12g1710 667 Gene3D AP2/ERF domain 339 405 IPR036955 GO:0003700|GO:0006355
Mibi12g1710 667 Gene3D AP2/ERF domain 439 499 IPR036955 GO:0003700|GO:0006355
Mibi12g1710 667 ProSiteProfiles AP2/ERF domain profile. 340 403 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1710 Mibi-ChrMibi12 33287909 33291375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1710 267 667 AP2-EREBP Transcription Factor Family AT4G37750 54.483 1.15e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi12g1710 AP2 4.4e-10 CL0081