Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1704 ATGGGGAGGGCTCCTTGCTGTGACAAAGCCAACGTGAAGAAAGGGCCATGGTCTCCTGAGGAAGACGCCAAGCTCAAGTCCTATATTGAGCAAAACGGCACCGGTGGCAACTGGATTGCCTTGCCCCAAAAGATAGGGCTTAAGAGATGTGGGAAAAGTTGTCGCCTAAGGTGGTTGAATTATCTGAGGCCAAACATAAAGCATGGGGGTTTCTCGGAGGAAGAAGACAACATAATATGCAGTCTGTATGCCACTATTGGAAGCAGGTGGTCAATAATAGCATCACAATTACCGGGGAGGACAGATAATGATATAAAGAACTACTGGAACACCAGGCTGAGGAAGAAGCTCCTGGGAAAAAACCGCAAGGAACAGCATGCCCAAGCTCGCCCAAAGCTAGCTATGAAGAACCAAACTGAAAATTTGGTGACACCTACGACCCAAAATCCCACCTGGCCAGCCCAACAATATCTTGATCTCAACCATGAAAGAAACTGGGCAAATAAAGTAGAGGAAACATTATTACTCTCTCACAATAATCACCAACAATCATCATACTCACAAACACCACTTTCCCATACCATGAATTCTGGCTACCAACTTGTGCAACTAGAACAACAACCATACTCAACCTCCATAAATTCAGCATGCGCAACAGCACCAATGGTGAATAATAGCAGCAATAGCAGTTATGAATCATCGAACATTTTCGAAGGCTTTGAAAACTTCTCTGACGAATATTGGAGTGAGTTGGTGAGTAGTATGAGGCCTCAACAACAACAAGAAGGAGATGAAACTTTGAATGGTTACTGTGGAATGGGTATAAGCAGCTGTGCATCAACTTCAACAGAAAGCACTAGCTGGAGTGATACCACCTCTCACATCCACGTTTACTCTCCTATGCTTTCTGGATACAAAGGAATAATGCCTCATCATGATATTGCTTGTTTCGAGCAGGATTCTAACTACTTTGGAGTGCAATAG 984 0.44 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYATIGSRWSIIASQLPGRTDNDIKNYWNTRLRKKLLGKNRKEQHAQARPKLAMKNQTENLVTPTTQNPTWPAQQYLDLNHERNWANKVEETLLLSHNNHQQSSYSQTPLSHTMNSGYQLVQLEQQPYSTSINSACATAPMVNNSSNSSYESSNIFEGFENFSDEYWSELVSSMRPQQQQEGDETLNGYCGMGISSCASTSTESTSWSDTTSHIHVYSPMLSGYKGIMPHHDIACFEQDSNYFGVQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1704 327 CDD SANT 71 113 IPR001005 -
Mibi12g1704 327 SMART sant 13 64 IPR001005 -
Mibi12g1704 327 SMART sant 67 115 IPR001005 -
Mibi12g1704 327 CDD SANT 16 62 IPR001005 -
Mibi12g1704 327 Gene3D - 7 68 - -
Mibi12g1704 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mibi12g1704 327 Gene3D - 70 143 - -
Mibi12g1704 327 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi12g1704 327 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mibi12g1704 327 PANTHER OS09G0431300 PROTEIN 1 287 - -
Mibi12g1704 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mibi12g1704 327 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mibi12g1704 327 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi12g1704 327 FunFam Transcription factor RAX3 7 68 - -
Mibi12g1704 327 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1704 Mibi-ChrMibi12 33196236 33197407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1704 1 135 MYB Transcription Factor Family AT5G65790 86.029 1.40e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi12g1704 Myb_DNA-binding 3.3e-13 CL0123