Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1694 ATGCGCCTCCTTCTCTTGCTCCTTCTTCTTCTCCACTTCAACCACTCCCTTTCTTCACCCATCTCTGAGTACCACGCCCTTCTCTCCTTCAAGTCCTCCATTTCCAACGACCCTCACTCTTCTCTCTCCTCCTGGAACTCCTCCTCTGACTACTGCACATGGTCCGGCGTCACCTGCGACTCCCTCCGCCACGTGTCCTCTCTCAACCTCACCGGCCTCAGCCTCTCCGGCACACTCTCCAACGACCTCGCTCACCTTCCATTCCTCTCTAACCTCTCCCTCGCTGGTAACCAGTTCTCTGGTCCCCTCCCCTCAGGGATCTCAGCCATTCCTAACCTCCGCTTCCTCAACCTCTCAAACAATGCCTTCAATGGCACTTTCCCTAACGAATATTCCAACCTCAAGAACCTTCAAGTTCTCGACTTGTATAACAATAATATGAGTGGATCTCTTCCAAACATGGTTACCCAGATGACAAAGCTCCGTCATTTACATCTTGGGGGTAACTTTTTCTCCGGTCAGATCCCAAAGGAGTACGGACTTTGGGAACATTTGGAGTATTTGGCTGTTTCTGGTAATGAGCTTAATGGTACTATTCCGCCGGAGATTGGAAATTTGACCAGTCTTCGGGAACTGTATATCGGATACTTCAATGCTTATACACTTGGTATACCACCTGAGATTGGGAATTTAACAAGTCTTGTTAGATTTGATGCGGCGAACTGTGGATTGACTGGTGAGATTCCTCCTGAACTTGGGAAGCTTCAGAATCTCGATACTCTGTTTCTTCAGGTGAATGGTCTTTCAGGGTCTTTGACGCCTGAGCTTGGGAGATTGAAGAGCTTGAAGTCTATGGACTTGTCTAATAATGCGCTTACTGGTGAGATTCCGGAGAGCTTTAGTGAGCTGAAGAATCTGACGCTTTTGAACTTGTTTAGGAATAAGCTTCATGGGGATATTCCTGAGTTTATTGAGGATTTGCCTTCGCTTGAGGTGCTTCAGCTTTGGGAGAATAACTTCACTGGGAGTATTCCTCAGGGTTTGGGAAAGAATGGGAGGCTTGTGTTTGTTGATCTATCGTCTAACAAATTGACTGGGACTTTGCCTCCTGATATGTGCTTTGGCAATCATCTTCAGACTTTGATTATTCTGGAGAATTTTCTGTTTGGTCCTATCCCTGAATCGCTTGGGAGATGTGAGTCATTGACCAGGATTCGTATGGGAGAAAACTTTCTAAATGGGTCAATACCGAAGGGACTTTTTGGGCTTCCAAAACTCACTCAGGTTGAGCTGCAGGATAATCTCATCTCTGGGCAGTTTCCTCATGCAAGTATTTCTGTGGATCTTGGTCAGATCATTCTATCCAACAATCAGCTTTCTGGGGAGTTGCCCCCAACGATTGGGAACTTTTCTGGTATGCAGAAGCTTCTTCTTGATGGCAACAAGTTCTCAGGTCAAATCCCCCCTGAGATTGGGAGGTTGCAGCAGCTCTCAAAGGTAGATTTTAGTCATAACAAATTCTCAGGCCCTATTGCTCCGGAAATAAGTCATTGCAAGTTGTTGACGTTTGTTGATCTTAGCCGCAACGAACTTTCTGGTGAGATTCCAAATGAGATCACTGGTATGAGAATATTGAATTACTTGAATCTTTCAAGGAACCACCTAGTTGGCAGCATTCCTTCATCAGTAGCCTCCATGCAAAGCTTGACTTCTGTTGATTTTTCATACAACAATCTCTCTGGTTTGGTTCCTGGTACTGGCCAGTTTAGCTATTTCAACTACACATCATTCCTGGGTAACTCTGATCTTTGTGGTCCATATCTGGGTCCTTGCAAAGATGGGGTTGTAAATGGCACTCACCAGCCTCATGTTAAAGGTCCTCTGTCTGCTTCTATGAAGCTCTTACTGGTGCTTGGGTTGCTTGTATGTTCCATTGCATTTGCAGTTGCGGCAATAATAAAAGCTCGGTCACTGAAGAAGGCCAGCGAAGCTCGTGCATTTAAGTTGACTACATTCCAACGCTTGGACTTCTCCGTTGATGATGTTTTAGATAGCCTGAAAGAGGACAACATCATAGGGAAAGGAGGTGCAGGCATTGTATACAAAGGGACAATGCCCAATGGGGATCAGGTTGCTGTGAAAAGATTACCAGCTATGAGCAGAAGTTCTTCTCATGATCATGGGTTCAATGCGGAGATCCAGACATTAGGGAGAATCCGACATAGACACATTGTGAGATTACTAGGTTTCTGTTCAAACAATGAAACAAATCTTTTGGTCTATGAATTCATGCCGAATGGGAGTCTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGTCATTTGCTTTGGGACACCAGGTATAAAATTGCTGTGGAGGCTGCAAAGGGACTTTGCTACCTTCATCATGACTGTTCGCCACTTATAGTCCATAGAGATGTAAAATCGAACAATATCCTCCTTGACTCCAACTTTGAAGCACATGTTGCTGATTTCGGGCTTGCCAAGTTTCTTCAAGATTCAGGAACTTCTGAATGCATGTCGGCTATTGCTGGATCATATGGATACATAGCTCCAGAGTATGCCTACACACTAAAAGTTGATGAGAAGAGCGATGTGTACAGCTTTGGAGTGGTGCTTTTGGAGCTTATAACAGGCAGGAAACCAGTTGGAGAATTTGGTGATGGGGTGGACATTGTGCAATGGGTCAGAAAAATGACGGACTCAAAGAAGGAAGAAGTCGTTAAAGTTCTTGATCCTAGACTCTCATCTGTACCCCTTCCAGAGGTGGTGCATGTGTTTTATGTAGCCATGCTTTGTGTGGAAGAGCAGGCAGTGGAGAGACCAACTATGCGCGAAGTTGTTCAAATCCTAACCGAACTTCCGAAGCCTCCAGGCTCTAAACAGGCAGACCTTGCAATCACAGAATCTCCTATGTCATCGACAAACACTTCAGAGGCTTCAACCACTCAATCTAAAGAATTGAAGGATGAAACTACTCAATCTCCACGCGCTGATCTCCTCGGCATTTGA 3030 0.4528 MRLLLLLLLLLHFNHSLSSPISEYHALLSFKSSISNDPHSSLSSWNSSSDYCTWSGVTCDSLRHVSSLNLTGLSLSGTLSNDLAHLPFLSNLSLAGNQFSGPLPSGISAIPNLRFLNLSNNAFNGTFPNEYSNLKNLQVLDLYNNNMSGSLPNMVTQMTKLRHLHLGGNFFSGQIPKEYGLWEHLEYLAVSGNELNGTIPPEIGNLTSLRELYIGYFNAYTLGIPPEIGNLTSLVRFDAANCGLTGEIPPELGKLQNLDTLFLQVNGLSGSLTPELGRLKSLKSMDLSNNALTGEIPESFSELKNLTLLNLFRNKLHGDIPEFIEDLPSLEVLQLWENNFTGSIPQGLGKNGRLVFVDLSSNKLTGTLPPDMCFGNHLQTLIILENFLFGPIPESLGRCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNLISGQFPHASISVDLGQIILSNNQLSGELPPTIGNFSGMQKLLLDGNKFSGQIPPEIGRLQQLSKVDFSHNKFSGPIAPEISHCKLLTFVDLSRNELSGEIPNEITGMRILNYLNLSRNHLVGSIPSSVASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNSDLCGPYLGPCKDGVVNGTHQPHVKGPLSASMKLLLVLGLLVCSIAFAVAAIIKARSLKKASEARAFKLTTFQRLDFSVDDVLDSLKEDNIIGKGGAGIVYKGTMPNGDQVAVKRLPAMSRSSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNNETNLLVYEFMPNGSLGEVLHGKKGGHLLWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSKKEEVVKVLDPRLSSVPLPEVVHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKQADLAITESPMSSTNTSEASTTQSKELKDETTQSPRADLLGI 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1694 1009 SUPERFAMILY L domain-like 351 611 - -
Mibi12g1694 1009 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Mibi12g1694 1009 MobiDBLite consensus disorder prediction 963 1009 - -
Mibi12g1694 1009 Pfam Leucine rich repeat 111 169 IPR001611 GO:0005515
Mibi12g1694 1009 Pfam Leucine rich repeat 257 316 IPR001611 GO:0005515
Mibi12g1694 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 331 615 - -
Mibi12g1694 1009 Gene3D Ribonuclease Inhibitor 371 612 IPR032675 -
Mibi12g1694 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 80 323 - -
Mibi12g1694 1009 Gene3D Transferase(Phosphotransferase) domain 1 764 974 - -
Mibi12g1694 1009 Gene3D Phosphorylase Kinase; domain 1 649 763 - -
Mibi12g1694 1009 Gene3D Ribonuclease Inhibitor 21 176 IPR032675 -
Mibi12g1694 1009 SMART LRR_typ_2 134 157 IPR003591 -
Mibi12g1694 1009 SMART LRR_typ_2 566 589 IPR003591 -
Mibi12g1694 1009 SMART LRR_typ_2 158 184 IPR003591 -
Mibi12g1694 1009 SMART LRR_typ_2 327 351 IPR003591 -
Mibi12g1694 1009 SMART LRR_typ_2 279 303 IPR003591 -
Mibi12g1694 1009 SMART LRR_typ_2 470 494 IPR003591 -
Mibi12g1694 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Mibi12g1694 1009 SUPERFAMILY RNI-like 67 437 - -
Mibi12g1694 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 764 974 - -
Mibi12g1694 1009 ProSiteProfiles Protein kinase domain profile. 686 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1694 1009 Gene3D Ribonuclease Inhibitor 177 218 IPR032675 -
Mibi12g1694 1009 Pfam Protein tyrosine and serine/threonine kinase 688 957 IPR001245 GO:0004672|GO:0006468
Mibi12g1694 1009 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 655 763 - -
Mibi12g1694 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 218 958 - -
Mibi12g1694 1009 SUPERFAMILY Protein kinase-like (PK-like) 679 957 IPR011009 -
Mibi12g1694 1009 MobiDBLite consensus disorder prediction 972 989 - -
Mibi12g1694 1009 Gene3D Ribonuclease Inhibitor 219 370 IPR032675 -
Mibi12g1694 1009 SMART serkin_6 686 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1694 Mibi-ChrMibi12 33095516 33098989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1694 12 976 Receptor kinase-like Gene Family AT5G65700 81.295 0.0 1571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi12g1694 PK_Tyr_Ser-Thr 8.6e-47 CL0016