Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1693 ATGGAGATTTCATCCAAATACTTCGCTGAGCTAGACATGGAGGATATGAGACTGTTCGAGCACTACCCACAATTGGATTGTTTGGCGTTCGACGATGAGACCTTTCAAGATTTGTCAGGATGTGGCGACAGTTACTCATGTTTGGGCTCCAAAAGAAGGCGTGAGGAGTGGTTCCCAGAGGAGAGTCCTGAATCTTATGTCTCCCAACAAAGAGAAACCAAACAACTCAAGAGTATCAACAACAACACTAGCTCTAGTTGGACATCTTCCACCACCCCAACGATAATGGGCGATCCAAAAGCCCCTTCCAACAATTCAGCTTCTAATTCAACTTCCCAAATCATTTCCTTTGACAGCTCTAATTCCTCCCCAGATGTCGCTTCTCACCAGAAATTTCACAGCCTGGATTCTGGTGCTGTTGTCAAGCCTAAAACCGAGAACTTGGACTTCAGTGCTCCTTTCTCCATCTCTCATCAACCCTCTGCCTATGACCACAAACATGATTCCTTTTTTCTCCAGCATGAGAAAAAAACTGCCTCCATTGCCAGAAATCCCATTCAGGCTCAAGATCACGTCATGGCCGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAGGTTTATTGCTCTCTCCGCCATCCTTCCTGGCCTCAAAAAGGTACGACACTTTAACTCTATGCCAATGGATAAGGCTTCGGTCCTTGGAGATGCAATCAACTATGTGAAACAACTTCAGGAGAGAGTGAAGACTCTTGAGGAAGAGGTTAACAAGAAAGCAGTTGAAACCGCAGTGTTTATGAACAGGTCTGTTCTTTGCTCCGACGATGATGGCTCCTCCTCCGATGACAAATCCGACCGGCCACTGCCGGAGATCGAAGCAAGAGTGTCAGGTAAGGAGGTGCTAATCAGAATCCACTGTGACAAACACAATGGATGTTGTGCCACCATACTCTCCCATTTGCAACATCTCAATCTCATTGTCCAAAGTAGCAGCTTCTTACCCTTTGGGGATAACACTGTTGATATTACTATTGTTGCTAAGATGAACCAGGAAGAGTGCTTGACTGCAAAGAATATAGTGAGAAGCCTAAGGCAGGGCCTGAGGCAATTAAATTAA 1113 0.4555 MEISSKYFAELDMEDMRLFEHYPQLDCLAFDDETFQDLSGCGDSYSCLGSKRRREEWFPEESPESYVSQQRETKQLKSINNNTSSSWTSSTTPTIMGDPKAPSNNSASNSTSQIISFDSSNSSPDVASHQKFHSLDSGAVVKPKTENLDFSAPFSISHQPSAYDHKHDSFFLQHEKKTASIARNPIQAQDHVMAERKRREKLSQRFIALSAILPGLKKVRHFNSMPMDKASVLGDAINYVKQLQERVKTLEEEVNKKAVETAVFMNRSVLCSDDDGSSSDDKSDRPLPEIEARVSGKEVLIRIHCDKHNGCCATILSHLQHLNLIVQSSSFLPFGDNTVDITIVAKMNQEECLTAKNIVRSLRQGLRQLN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1693 370 MobiDBLite consensus disorder prediction 63 129 - -
Mibi12g1693 370 PANTHER BHLH TRANSCRIPTION FACTOR 67 367 - -
Mibi12g1693 370 Gene3D - 178 258 IPR036638 GO:0046983
Mibi12g1693 370 SMART finulus 192 249 IPR011598 GO:0046983
Mibi12g1693 370 Pfam Helix-loop-helix DNA-binding domain 189 244 IPR011598 GO:0046983
Mibi12g1693 370 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 243 IPR011598 GO:0046983
Mibi12g1693 370 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 191 266 IPR036638 GO:0046983
Mibi12g1693 370 MobiDBLite consensus disorder prediction 58 129 - -
Mibi12g1693 370 Coils Coil 233 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1693 Mibi-ChrMibi12 33082703 33084087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1693 88 366 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.085 2.98e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g1693 HLH 2.8e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1693 12 33082703 33084087 Mibi10g0323 10 5186986 5189017 CCT