Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1692 ATGAAGAAATATTGGAACAAAATCTTCATTCCATCTCTCCTTCCTCCTCTCTCTTCCTCGAAGGTAAGCACAAGCTTCTTTGTTGCTTATCCCGGCTCTCTAGGAGGAAAATTAAAGGAGATTAAAATGGAGATTTCATCTAAGTACTTTACTGAGCTAGACATGGAGGATATGAGCCTGTTCGAGCACTACCCACAATTGGATTGTTTGGCGTTCGACGATGAGATCTTTCAAGATTTGTCAGGATGTGGCGACAGTTATTCATGTTTAGGCTCCAAAAGAAGGCGTGAGGAGTGGTTCCCAGAGGAGAGTCCTGAATCTTATGTCTCCCAACAAAGAGAAACCAAACAACCCAAGAGCATCAACAACAACACTAGCTCTAGTTGGACATCTTCTACCACCCCAACAAAAATGGCTGATCCCATCGTCCCTTCCAACAATTCAGCTTCTAATTCCTCCTCGCATATCATTTCATTTGAAAACTCTAATTCTTCCCCAGACGTGGCTTCTCACCAGAAATTTCACAGCTTGGATTCTAGTGTTGTTGTCAAGCCTAAAACCGAGAACTTGGATTTCAGCTCTCCATTCTATATTTCCCAACCCACCTTTGACCACAAACCTGATTCCTATTGGCTCCCACAAGAGGAAAAAACTGCCCCCATTGCCAGAAATCCCATTCAGGCTCAAGATCATGTCATGGCCGAAAGAAAACGAAGGGAAAAACTTAGCCAGAGGTTTATTGCCCTTTCCGCCATCCTTCCTGGCCTCAAAAAGATGGATAAGGCTTCGGTGCTAGGAGATGCAATCAACTATGTGAAACAACTTCAGGAGAGAGTGAAAACACTTGAGGAAGAGGCTAACAAGAAAGCAGTTGAAACCGCCGTGTTTGTGAACAGGTCTGTTCTCTATTCCGATGATGGTGGCTCCTCCTCCGATGATAATTCCACCGGCTGCTCCGACCAGCCTCTGCCGGAGATCGAAGCAAGAGTGTCAGGGAAGGAGGTGCTAATCAGAATCCACTGTGATAAACACAATGGATGTTGTGCCACCATACTCTCCCATTTGAAACATCTCAATCTCACTGTCCAAAGTAGCAGCTTCTTACCCTTTGGGGATGCCACTATTGATATTACTATTGTTGCTCAGATGAACAAGGAAGAATGTGTGACAGCAAAAGATATAGTAAGAAGTCTGAGGCAGGGCCTGGGTCAATTAATTTGA 1221 0.4447 MKKYWNKIFIPSLLPPLSSSKVSTSFFVAYPGSLGGKLKEIKMEISSKYFTELDMEDMSLFEHYPQLDCLAFDDEIFQDLSGCGDSYSCLGSKRRREEWFPEESPESYVSQQRETKQPKSINNNTSSSWTSSTTPTKMADPIVPSNNSASNSSSHIISFENSNSSPDVASHQKFHSLDSSVVVKPKTENLDFSSPFYISQPTFDHKPDSYWLPQEEKTAPIARNPIQAQDHVMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAINYVKQLQERVKTLEEEANKKAVETAVFVNRSVLYSDDGGSSSDDNSTGCSDQPLPEIEARVSGKEVLIRIHCDKHNGCCATILSHLKHLNLTVQSSSFLPFGDATIDITIVAQMNKEECVTAKDIVRSLRQGLGQLI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1692 406 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 231 295 IPR036638 GO:0046983
Mibi12g1692 406 SMART finulus 232 281 IPR011598 GO:0046983
Mibi12g1692 406 MobiDBLite consensus disorder prediction 100 170 - -
Mibi12g1692 406 Pfam Helix-loop-helix DNA-binding domain 229 276 IPR011598 GO:0046983
Mibi12g1692 406 CDD bHLH_AtNAI1_like 228 300 - -
Mibi12g1692 406 Gene3D - 221 290 IPR036638 GO:0046983
Mibi12g1692 406 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 226 275 IPR011598 GO:0046983
Mibi12g1692 406 PANTHER BHLH TRANSCRIPTION FACTOR 107 402 - -
Mibi12g1692 406 MobiDBLite consensus disorder prediction 105 170 - -
Mibi12g1692 406 Coils Coil 265 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1692 Mibi-ChrMibi12 33057014 33058649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1692 99 406 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.264 1.46e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g1692 HLH 7.1e-10 No_clan