Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1691 ATGGAGATTTCATCCAAGTACTTGTTGGACGAGCTGGTTCCTAGCATATTCGAGCAGTACCCTGTGGATTCTACGGCGTACGAGGTTGACAACTTTCAGAATTTGTCAGGATGTGGAGACAGTTATTCATGTTTAAGCTCAAAAAGAAGGCGTGATGCGTGGTTCCCAGAAGAGAGTCCTGAATCTTATATCTCGCAACAAACACCAACCAAGCAACTCAAGAGTATCTACAAGAACGCAAGCTCTAGCTGGACATCTTCCACTACTCCAACTATGGCAGATCCCGTAGTCCCTTCTAACAATTCAGCTTCTAATTCCTCCTCCCATATCATATCTTTTGAGAATTCTAATTCCTCCCCCGACGTGGCTTCTCACCCCCAATTTCACAGCTTGGATTCTAGTGCCGTTGTTAAGCCTAAAACCGAGAGCTTGGATTTTAGTGCTCCTTTCTCCATTTCTCAACCCACTTCCTACGACCACAAACCTGATTCCTTTTGGCTCCCACGTGAAAAGGAAACTGCCCCCATTGCCAGAAATCCCATCCAGGCTCAAGATCACGTCATGGCCGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAGGTTTATTGCCCTTTCCGCCATCCTTCCTGGTCTCAAAAAGATGGATAAGGCTTCAGTGCTGGGAGACGCAATCAACTATGTGAAACAACTTCAGGAGAGAGTGAAGACACTTGAGGAAGAGGTTAACAAGAAAGCAGTTGAAACCGCCGTGTTTGTGAACAGGTCTGTTCTCTCCTCCGACGATGACGGCTCCTCATCCGATGGTAACTCCGACCAGCTACTGCCGGAGATCGAAGCAAGAGTGTCAGGTAAGGAGGTGCTAATCAGAATCCACTGTGACAAACACAATGGATGTTGTGCCACCATACTTTCCCACTTGGAACATCTCAATCTCATTGTCCAGAGTAGTAGCTTCTTGCCCTTTGGGGATTCCACTGTTGATATTACTATTGTAGCTAAGATGAACCAGGAAGAATGTGTGACAGCGAAGGATATAGTAAGAAGCCTGAGGCAGGGCCTGGGGCAATTAATTTGA 1074 0.4655 MEISSKYLLDELVPSIFEQYPVDSTAYEVDNFQNLSGCGDSYSCLSSKRRRDAWFPEESPESYISQQTPTKQLKSIYKNASSSWTSSTTPTMADPVVPSNNSASNSSSHIISFENSNSSPDVASHPQFHSLDSSAVVKPKTESLDFSAPFSISQPTSYDHKPDSFWLPREKETAPIARNPIQAQDHVMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAINYVKQLQERVKTLEEEVNKKAVETAVFVNRSVLSSDDDGSSSDGNSDQLLPEIEARVSGKEVLIRIHCDKHNGCCATILSHLEHLNLIVQSSSFLPFGDSTVDITIVAKMNQEECVTAKDIVRSLRQGLGQLI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1691 357 PANTHER BHLH TRANSCRIPTION FACTOR 59 353 - -
Mibi12g1691 357 Gene3D - 176 245 IPR036638 GO:0046983
Mibi12g1691 357 MobiDBLite consensus disorder prediction 83 127 - -
Mibi12g1691 357 Coils Coil 220 247 - -
Mibi12g1691 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 230 IPR011598 GO:0046983
Mibi12g1691 357 Pfam Helix-loop-helix DNA-binding domain 184 231 IPR011598 GO:0046983
Mibi12g1691 357 SMART finulus 187 236 IPR011598 GO:0046983
Mibi12g1691 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 186 248 IPR036638 GO:0046983
Mibi12g1691 357 CDD bHLH_AtNAI1_like 183 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1691 Mibi-ChrMibi12 33041189 33042567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1691 66 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 41.751 5.37e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g1691 HLH 5.9e-10 No_clan