Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1681 ATGGCTCCTCTAGAAAACACTGCCCTTGTTACATCATCCATGACCCAAAACCCTCCCAATAATCTCCCATCACCAAACCCTAACTCCTCTCCTATGTGGAATCCTGAAGAAGAAGAAGACTCATGGGAAGTTAGAGCTTTTGCTGAAGACACAAGAAGTGTTATGGGCACCACTTGGCCTCCAAGGTCTTACACTTGCACTTTTTGTAGAAGGGAGTTTCGCTCCGCCCAAGCCCTCGGAGGCCACATGAACGTCCACCGCCGTGACCGGGCCCGCCTCCACCACCGAATAGTCCACCCAAACACTTCACTCATAATCCCACCACCATCAGTGCAAGAACTTGTCCCTAAAAATAATGGATTGTGTTTTCTCTATCGTTTACCTTCAGCCTCTAATTATCGTAATAGTAATAATAATCCCACCTTCGTCTCAGCCTGTAACAACACTTGTCCTCCTCCACCTCCTTCTCCTCGTCTCACCGGAGATTCACCTTCTACACTTCTCTCCATATCTCCTTATCCGGCAAACAAGTTTGATTTTTCAGTGCTAAGATCTGGCTGTAATATTTCTTCTTACTCTAATAACTCCTCCAAATTTGAACTTCCCACCATCAACTCCTCCATTGATAGCCATGAAGAGCTTGATCTAGAGCTCCGACTAGGCCATAGGCCAACACCTACCTGA 684 0.4664 MAPLENTALVTSSMTQNPPNNLPSPNPNSSPMWNPEEEEDSWEVRAFAEDTRSVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHRIVHPNTSLIIPPPSVQELVPKNNGLCFLYRLPSASNYRNSNNNPTFVSACNNTCPPPPPSPRLTGDSPSTLLSISPYPANKFDFSVLRSGCNISSYSNNSSKFELPTINSSIDSHEELDLELRLGHRPTPT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1681 227 MobiDBLite consensus disorder prediction 1 40 - -
Mibi12g1681 227 MobiDBLite consensus disorder prediction 1 19 - -
Mibi12g1681 227 SMART c2h2final6 64 86 IPR013087 -
Mibi12g1681 227 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mibi12g1681 227 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Mibi12g1681 227 Pfam C2H2-type zinc finger 64 88 - -
Mibi12g1681 227 Gene3D Classic Zinc Finger 53 102 - -
Mibi12g1681 227 SUPERFAMILY beta-beta-alpha zinc fingers 61 91 IPR036236 -
Mibi12g1681 227 PANTHER OS07G0101800 PROTEIN 36 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1681 Mibi-ChrMibi12 32913982 32914665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1681 32 224 C2H2 Transcription Factor Family AT4G17810 38.647 3.82e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi12g1681 zf-C2H2_6 4.6e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1681 12 32913982 32914665 Mibi12g1681 12 32913982 32914665 ECH